Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33250

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,039,916	+		BPHYT_RS33240	0.33	+0.9
3,039,917	-		BPHYT_RS33240	0.33	+0.4
3,040,124	-		BPHYT_RS33240	0.70	+0.4
3,040,370	+				+1.4
3,040,371	-				-1.3
3,040,686	+		BPHYT_RS33245	0.71	-1.4
3,040,686	+		BPHYT_RS33245	0.71	+0.3
3,040,687	-		BPHYT_RS33245	0.71	-0.4
3,040,758	+				-0.7
3,040,771	-				+0.8
3,040,829	+				-1.2
3,040,989	-				+0.3
3,041,000	+				+0.8
3,041,006	+				-1.0
3,041,006	+				+0.0
3,042,016	+		BPHYT_RS33250	0.36	+1.4
3,042,081	+		BPHYT_RS33250	0.38	+0.3
3,042,265	-		BPHYT_RS33250	0.44	+0.3
3,042,288	-		BPHYT_RS33250	0.44	-0.1
3,042,494	+		BPHYT_RS33250	0.51	+0.6
3,042,495	-		BPHYT_RS33250	0.51	-0.2
3,042,502	-		BPHYT_RS33250	0.51	+0.1
3,042,813	-		BPHYT_RS33250	0.61	-0.9
3,042,872	+		BPHYT_RS33250	0.63	-0.6
3,042,872	+		BPHYT_RS33250	0.63	-1.7
3,042,872	+		BPHYT_RS33250	0.63	-0.0
3,042,872	+		BPHYT_RS33250	0.63	+1.6
3,042,873	-		BPHYT_RS33250	0.63	-0.2
3,042,942	+		BPHYT_RS33250	0.65	+1.0
3,043,181	+		BPHYT_RS33250	0.73	+0.3
3,043,274	+		BPHYT_RS33250	0.76	+0.7
3,043,310	+		BPHYT_RS33250	0.77	+0.5
3,043,413	-		BPHYT_RS33250	0.81	-0.4
3,043,413	-		BPHYT_RS33250	0.81	-1.9
3,043,424	+		BPHYT_RS33250	0.81	+0.2
3,043,425	-		BPHYT_RS33250	0.81	-1.6
3,043,610	+		BPHYT_RS33250	0.87	-0.3
3,043,611	-		BPHYT_RS33250	0.87	+0.6
3,043,770	-				+0.1
3,043,892	+				-0.2
3,043,892	+				+1.2
3,044,303	-		BPHYT_RS33255	0.36	-0.5
3,044,476	+		BPHYT_RS33255	0.58	-0.5
3,044,479	+		BPHYT_RS33255	0.59	-0.3
3,044,480	-		BPHYT_RS33255	0.59	-2.5
3,044,480	-		BPHYT_RS33255	0.59	-0.6
3,044,494	+		BPHYT_RS33255	0.61	+0.5
3,044,512	+		BPHYT_RS33255	0.63	+1.3
3,044,520	-		BPHYT_RS33255	0.64	+4.3
3,044,520	-		BPHYT_RS33255	0.64	-0.0
3,044,687	-		BPHYT_RS33255	0.85	+0.4
3,044,707	-		BPHYT_RS33255	0.87	+0.1
3,044,942	-				+0.4
3,044,942	-				-0.5
3,044,988	-				-1.9
3,044,995	+				+0.1
3,044,995	+				+0.1