Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32125

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,779,224	+		BPHYT_RS32115	0.79	+0.9
2,779,279	-				-0.7
2,779,282	+				+0.5
2,779,300	-				-1.1
2,779,300	-				+0.6
2,779,339	-				+1.5
2,779,359	-				+3.0
2,779,359	-				-0.7
2,779,390	+				-2.0
2,779,391	-				+1.0
2,779,391	-				+1.0
2,779,392	+				+1.0
2,779,468	-				-0.8
2,779,494	-				+0.6
2,779,633	+		BPHYT_RS32120	0.38	+0.7
2,779,634	-		BPHYT_RS32120	0.39	-0.4
2,779,634	-		BPHYT_RS32120	0.39	+2.4
2,779,726	+		BPHYT_RS32120	0.60	+1.9
2,779,755	-		BPHYT_RS32120	0.67	-0.8
2,779,811	-		BPHYT_RS32120	0.80	+0.0
2,780,046	+				-0.8
2,780,458	-		BPHYT_RS32125	0.31	+0.7
2,780,678	+		BPHYT_RS32125	0.52	-1.3
2,780,678	+		BPHYT_RS32125	0.52	+2.7
2,780,678	+		BPHYT_RS32125	0.52	+1.4
2,780,779	+		BPHYT_RS32125	0.62	+0.8
2,780,848	+		BPHYT_RS32125	0.69	+0.9
2,780,849	-		BPHYT_RS32125	0.69	+1.0
2,780,916	+		BPHYT_RS32125	0.76	+2.1
2,780,916	+		BPHYT_RS32125	0.76	+0.1
2,780,917	-		BPHYT_RS32125	0.76	+1.4
2,780,986	+		BPHYT_RS32125	0.83	-0.1
2,780,987	-		BPHYT_RS32125	0.83	+1.4
2,781,278	+		BPHYT_RS32130	0.13	+0.4
2,781,278	+		BPHYT_RS32130	0.13	-0.6
2,781,278	+		BPHYT_RS32130	0.13	-0.5
2,781,279	-		BPHYT_RS32130	0.13	+0.7
2,781,698	-				+0.4
2,781,708	-				+0.0
2,782,115	-		BPHYT_RS32135	0.27	-0.3