Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32015

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,743,596	-		BPHYT_RS32010	0.70	-0.6
2,743,620	-		BPHYT_RS32010	0.71	+0.4
2,743,817	+		BPHYT_RS32010	0.78	+0.5
2,743,852	+		BPHYT_RS32010	0.80	-0.2
2,743,853	-		BPHYT_RS32010	0.80	+1.7
2,743,853	-		BPHYT_RS32010	0.80	-0.4
2,743,853	-		BPHYT_RS32010	0.80	-0.1
2,743,855	-		BPHYT_RS32010	0.80	+0.9
2,743,928	+		BPHYT_RS32010	0.83	-1.1
2,744,041	+		BPHYT_RS32010	0.87	+0.4
2,744,121	+				+1.1
2,744,199	+				-0.9
2,744,200	-				-1.6
2,744,582	-		BPHYT_RS32015	0.12	+0.1
2,744,784	+		BPHYT_RS32015	0.23	+0.4
2,744,836	-		BPHYT_RS32015	0.26	-2.2
2,745,022	+		BPHYT_RS32015	0.36	-0.2
2,745,022	+		BPHYT_RS32015	0.36	-0.6
2,745,109	-		BPHYT_RS32015	0.41	-0.2
2,745,138	-		BPHYT_RS32015	0.42	-0.5
2,745,180	+		BPHYT_RS32015	0.45	+0.4
2,745,181	-		BPHYT_RS32015	0.45	+4.3
2,745,561	-		BPHYT_RS32015	0.66	+2.9
2,745,670	+		BPHYT_RS32015	0.72	+0.9
2,745,670	+		BPHYT_RS32015	0.72	+1.3
2,745,808	-		BPHYT_RS32015	0.80	+0.5
2,745,839	-		BPHYT_RS32015	0.81	+2.3
2,745,895	-		BPHYT_RS32015	0.84	-1.2
2,745,895	-		BPHYT_RS32015	0.84	+0.1
2,745,895	-		BPHYT_RS32015	0.84	+0.8
2,746,386	-		BPHYT_RS32020	0.18	-0.1
2,746,461	-		BPHYT_RS32020	0.24	-0.2
2,746,575	+		BPHYT_RS32020	0.34	+0.1
2,746,744	+		BPHYT_RS32020	0.48	-1.8
2,746,745	-		BPHYT_RS32020	0.48	+0.5
2,746,913	+		BPHYT_RS32020	0.62	-1.0
2,747,145	+		BPHYT_RS32020	0.81	-2.1
2,747,145	+		BPHYT_RS32020	0.81	+0.1
2,747,156	-				+2.3