Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31650
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
|---|---|---|---|---|---|
| remove | |||||
| 2,655,184 | + | BPHYT_RS31645 | 0.70 | +0.7 | |
| 2,655,184 | + | BPHYT_RS31645 | 0.70 | +0.1 | |
| 2,655,805 | - | BPHYT_RS31650 | 0.16 | +0.1 | |
| 2,656,832 | - | -1.6 | |||
| 2,656,832 | - | +1.7 | |||
| 2,656,876 | + | BPHYT_RS31655 | 0.13 | +0.5 | |
| 2,656,990 | + | BPHYT_RS31655 | 0.22 | +1.2 | |
| 2,657,118 | + | BPHYT_RS31655 | 0.32 | -0.6 | |
| 2,657,118 | + | BPHYT_RS31655 | 0.32 | +3.5 | |
| 2,657,118 | + | BPHYT_RS31655 | 0.32 | +1.5 | |
| 2,657,119 | - | BPHYT_RS31655 | 0.32 | -0.9 | |
| 2,657,454 | - | BPHYT_RS31655 | 0.60 | +1.5 | |
| 2,657,454 | - | BPHYT_RS31655 | 0.60 | -0.6 | |
| 2,657,491 | + | BPHYT_RS31655 | 0.63 | +0.6 | |
| 2,657,573 | + | BPHYT_RS31655 | 0.69 | +1.6 | |
| 2,657,581 | - | BPHYT_RS31655 | 0.70 | +0.4 |
Or see this region's nucleotide sequence