Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31645
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,653,360 | + | BPHYT_RS31640 | 0.32 | +0.4 | |
2,653,370 | - | BPHYT_RS31640 | 0.34 | -0.1 | |
2,653,584 | + | BPHYT_RS31640 | 0.61 | +0.6 | |
2,653,938 | - | -3.2 | |||
2,654,042 | + | +0.0 | |||
2,654,138 | - | -3.5 | |||
2,654,557 | + | BPHYT_RS31645 | 0.28 | -0.2 | |
2,654,560 | + | BPHYT_RS31645 | 0.29 | +2.3 | |
2,654,561 | - | BPHYT_RS31645 | 0.29 | +0.4 | |
2,655,184 | + | BPHYT_RS31645 | 0.70 | +0.7 | |
2,655,184 | + | BPHYT_RS31645 | 0.70 | +0.1 | |
2,655,805 | - | BPHYT_RS31650 | 0.16 | +0.1 |
Or see this region's nucleotide sequence