Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29430
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,156,286 | + | -0.2 | |||
2,156,447 | + | +0.2 | |||
2,156,594 | + | BPHYT_RS29425 | 0.27 | -2.9 | |
2,156,768 | + | BPHYT_RS29425 | 0.48 | +0.5 | |
2,156,768 | + | BPHYT_RS29425 | 0.48 | +0.8 | |
2,156,768 | + | BPHYT_RS29425 | 0.48 | -1.7 | |
2,156,792 | - | BPHYT_RS29425 | 0.51 | -0.0 | |
2,156,918 | + | BPHYT_RS29425 | 0.66 | -1.2 | |
2,157,760 | + | BPHYT_RS29430 | 0.39 | -0.2 | |
2,157,761 | - | BPHYT_RS29430 | 0.39 | +2.2 | |
2,157,761 | - | BPHYT_RS29430 | 0.39 | +0.1 | |
2,157,776 | - | BPHYT_RS29430 | 0.40 | -0.2 | |
2,158,210 | + | BPHYT_RS29430 | 0.74 | +1.6 | |
2,158,694 | - | -0.8 |
Or see this region's nucleotide sequence