Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27830
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
1,805,499 | + | -0.6 | |||
1,805,500 | - | +0.2 | |||
1,805,500 | - | -0.2 | |||
1,805,913 | + | BPHYT_RS27830 | 0.35 | -1.0 | |
1,805,920 | + | BPHYT_RS27830 | 0.36 | +0.2 | |
1,806,047 | - | BPHYT_RS27830 | 0.49 | -0.8 | |
1,806,437 | - | BPHYT_RS27830 | 0.90 | +2.4 | |
1,806,625 | + | -1.1 | |||
1,807,280 | - | BPHYT_RS27835 | 0.46 | +0.8 | |
1,807,352 | + | BPHYT_RS27835 | 0.55 | -2.5 | |
1,807,376 | - | BPHYT_RS27835 | 0.58 | -1.4 | |
1,807,376 | - | BPHYT_RS27835 | 0.58 | -1.4 |
Or see this region's nucleotide sequence