Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24595

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
1,086,098	+		BPHYT_RS24590	0.75	-0.6
1,086,236	-				+0.3
1,086,333	+				-0.1
1,086,333	+				+0.4
1,086,675	+				-1.0
1,087,070	+		BPHYT_RS24595	0.10	+0.1
1,087,070	+		BPHYT_RS24595	0.10	-0.5
1,087,070	+		BPHYT_RS24595	0.10	+0.7
1,087,071	-		BPHYT_RS24595	0.11	+1.2
1,087,172	+		BPHYT_RS24595	0.14	+0.9
1,087,214	+		BPHYT_RS24595	0.16	+0.4
1,087,578	-		BPHYT_RS24595	0.28	+0.1
1,087,635	-		BPHYT_RS24595	0.30	-2.2
1,087,829	+		BPHYT_RS24595	0.37	+0.8
1,088,052	-		BPHYT_RS24595	0.45	-0.1
1,088,243	-		BPHYT_RS24595	0.52	+0.2
1,088,477	-		BPHYT_RS24595	0.60	-0.7
1,088,615	+		BPHYT_RS24595	0.65	-0.1
1,088,615	+		BPHYT_RS24595	0.65	-0.2
1,088,615	+		BPHYT_RS24595	0.65	-0.3
1,088,616	-		BPHYT_RS24595	0.65	+0.3
1,088,708	+		BPHYT_RS24595	0.68	+1.7
1,088,708	+		BPHYT_RS24595	0.68	-2.1
1,089,164	+		BPHYT_RS24595	0.85	-0.3
1,089,336	-				-0.4
1,089,633	+				-3.0
1,089,919	+		BPHYT_RS24600	0.37	-0.7
1,089,920	-		BPHYT_RS24600	0.38	-1.2
1,089,931	+		BPHYT_RS24600	0.39	+0.4
1,090,177	+		BPHYT_RS24600	0.72	-0.2
1,090,434	-				+0.6
1,090,434	-				+0.3