Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24380

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
1,034,063	+				-0.2
1,034,142	+				-0.0
1,034,142	+				-1.9
1,034,277	-				-0.2
1,034,312	+		BPHYT_RS24375	0.12	+0.4
1,034,316	+		BPHYT_RS24375	0.13	+0.2
1,034,317	-		BPHYT_RS24375	0.13	+0.3
1,034,331	-		BPHYT_RS24375	0.14	+0.3
1,034,753	+		BPHYT_RS24375	0.68	+0.8
1,034,753	+		BPHYT_RS24375	0.68	+0.1
1,034,925	-				+0.3
1,034,993	+				-0.6
1,034,994	-				-0.2
1,035,052	+				+0.5
1,035,053	-				+0.9
1,035,053	-				+3.7
1,035,081	-				+0.1
1,035,081	-				-0.6
1,035,276	-		BPHYT_RS24380	0.21	-1.6
1,035,295	+		BPHYT_RS24380	0.22	+0.8
1,035,296	-		BPHYT_RS24380	0.22	+0.1
1,035,575	-		BPHYT_RS24380	0.43	+1.0
1,035,688	+		BPHYT_RS24380	0.51	-0.0
1,035,789	-		BPHYT_RS24380	0.59	-0.8
1,035,960	+		BPHYT_RS24380	0.71	+0.2
1,035,964	+		BPHYT_RS24380	0.72	+0.3
1,036,001	-		BPHYT_RS24380	0.75	-0.5
1,036,001	-		BPHYT_RS24380	0.75	-0.8
1,036,039	+		BPHYT_RS24380	0.77	+1.0
1,036,141	-		BPHYT_RS24380	0.85	+0.8
1,036,221	-				-0.8
1,036,268	-				-0.0
1,036,355	+				-0.4
1,036,356	-				+0.1
1,036,357	+				+1.1
1,036,370	+				+0.7
1,036,550	+		BPHYT_RS24385	0.16	+0.4
1,036,550	+		BPHYT_RS24385	0.16	-0.0
1,036,713	+		BPHYT_RS24385	0.42	+0.4
1,036,713	+		BPHYT_RS24385	0.42	-0.4
1,036,714	-		BPHYT_RS24385	0.42	+2.7
1,036,714	-		BPHYT_RS24385	0.42	+2.3
1,036,714	-		BPHYT_RS24385	0.42	+0.2
1,036,822	+		BPHYT_RS24385	0.59	+2.6
1,036,823	-		BPHYT_RS24385	0.59	-0.6
1,036,823	-		BPHYT_RS24385	0.59	+1.2
1,036,823	-		BPHYT_RS24385	0.59	-0.5
1,036,823	-		BPHYT_RS24385	0.59	-1.4
1,036,823	-		BPHYT_RS24385	0.59	-0.8
1,036,834	-		BPHYT_RS24385	0.61	-1.4
1,036,886	-		BPHYT_RS24385	0.69	+1.3
1,036,887	+		BPHYT_RS24385	0.69	+1.1
1,036,888	-				+3.1
1,036,888	-		BPHYT_RS24385	0.70	-0.6
1,036,888	-		BPHYT_RS24385	0.70	+0.1
1,037,056	+				+2.1
1,037,064	-				-0.2
1,037,064	-				+1.0
1,037,080	+				-0.3
1,037,081	-				-0.3
1,037,081	-				+0.1
1,037,081	-				-0.1
1,037,081	-				+1.3
1,037,081	-				+1.7
1,037,081	-				-0.1
1,037,248	-				+1.0