Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS23855 and BPHYT_RS23860 are separated by 31 nucleotides BPHYT_RS23860 and BPHYT_RS23865 are separated by 156 nucleotides BPHYT_RS23865 and BPHYT_RS23870 are separated by 320 nucleotides
BPHYT_RS23855: BPHYT_RS23855 - hypothetical protein, at 919,409 to 919,738
_RS23855
BPHYT_RS23860: BPHYT_RS23860 - malonic semialdehyde reductase, at 919,770 to 920,354
_RS23860
BPHYT_RS23865: BPHYT_RS23865 - 2OG-Fe(II) oxygenase, at 920,511 to 921,122
_RS23865
BPHYT_RS23870: BPHYT_RS23870 - LacI family transcription regulator, at 921,443 to 922,429
_RS23870
Position (kb) 920
921
922 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 919.583 kb on + strand, within BPHYT_RS23855 at 919.584 kb on - strand, within BPHYT_RS23855 at 919.584 kb on - strand, within BPHYT_RS23855 at 919.719 kb on - strand at 920.241 kb on + strand, within BPHYT_RS23860 at 920.241 kb on + strand, within BPHYT_RS23860 at 920.454 kb on + strand at 920.455 kb on - strand at 920.718 kb on + strand, within BPHYT_RS23865 at 920.719 kb on - strand, within BPHYT_RS23865 at 920.719 kb on - strand, within BPHYT_RS23865 at 920.725 kb on - strand, within BPHYT_RS23865 at 920.816 kb on + strand, within BPHYT_RS23865 at 921.190 kb on - strand at 921.358 kb on + strand at 921.556 kb on + strand, within BPHYT_RS23870 at 921.557 kb on - strand, within BPHYT_RS23870 at 921.771 kb on + strand, within BPHYT_RS23870 at 922.100 kb on - strand, within BPHYT_RS23870 at 922.101 kb on + strand, within BPHYT_RS23870
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 919,583 + BPHYT_RS23855 0.53 +3.4 919,584 - BPHYT_RS23855 0.53 +0.0 919,584 - BPHYT_RS23855 0.53 +1.1 919,719 - +3.6 920,241 + BPHYT_RS23860 0.81 -2.0 920,241 + BPHYT_RS23860 0.81 -0.1 920,454 + -1.0 920,455 - +0.2 920,718 + BPHYT_RS23865 0.34 +5.3 920,719 - BPHYT_RS23865 0.34 -1.5 920,719 - BPHYT_RS23865 0.34 -0.3 920,725 - BPHYT_RS23865 0.35 -0.1 920,816 + BPHYT_RS23865 0.50 -0.3 921,190 - -0.4 921,358 + -1.5 921,556 + BPHYT_RS23870 0.11 -0.5 921,557 - BPHYT_RS23870 0.12 +0.7 921,771 + BPHYT_RS23870 0.33 +0.6 922,100 - BPHYT_RS23870 0.67 -0.9 922,101 + BPHYT_RS23870 0.67 -1.1
Or see this region's nucleotide sequence