Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS23275 and BPHYT_RS23280 are separated by 23 nucleotides BPHYT_RS23280 and BPHYT_RS23285 are separated by 25 nucleotides BPHYT_RS23285 and BPHYT_RS23290 are separated by 263 nucleotides BPHYT_RS23290 and BPHYT_RS23295 are separated by 3 nucleotides
BPHYT_RS23275: BPHYT_RS23275 - 3-methylcrotonyl-CoA carboxylase subunit alpha, at 786,081 to 788,159
_RS23275
BPHYT_RS23280: BPHYT_RS23280 - phosphate ABC transporter substrate-binding protein, at 788,183 to 788,974
_RS23280
BPHYT_RS23285: BPHYT_RS23285 - hypothetical protein, at 789,000 to 789,278
_RS23285
BPHYT_RS23290: BPHYT_RS23290 - hypothetical protein, at 789,542 to 789,730
_RS23290
BPHYT_RS23295: BPHYT_RS23295 - O-methyltransferase, at 789,734 to 790,348
_RS23295
Position (kb) 788
789 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 787.391 kb on + strand, within BPHYT_RS23275 at 788.200 kb on - strand at 788.408 kb on - strand, within BPHYT_RS23280 at 788.615 kb on - strand, within BPHYT_RS23280 at 788.635 kb on - strand, within BPHYT_RS23280 at 788.944 kb on + strand at 788.945 kb on - strand at 788.946 kb on + strand at 788.947 kb on - strand at 789.268 kb on + strand at 789.278 kb on + strand at 789.339 kb on + strand at 789.560 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 787,391 + BPHYT_RS23275 0.63 +0.0 788,200 - +0.9 788,408 - BPHYT_RS23280 0.28 +0.5 788,615 - BPHYT_RS23280 0.55 -3.5 788,635 - BPHYT_RS23280 0.57 -0.4 788,944 + +0.4 788,945 - +0.1 788,946 + -1.0 788,947 - +0.1 789,268 + -0.4 789,278 + +0.5 789,339 + -0.8 789,560 + -0.4
Or see this region's nucleotide sequence