Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS23265 and BPHYT_RS23270 are separated by 41 nucleotides BPHYT_RS23270 and BPHYT_RS23275 are separated by 81 nucleotides BPHYT_RS23275 and BPHYT_RS23280 are separated by 23 nucleotides BPHYT_RS23280 and BPHYT_RS23285 are separated by 25 nucleotides
BPHYT_RS23265: BPHYT_RS23265 - methylcrotonoyl-CoA carboxylase, at 783,565 to 785,172
_RS23265
BPHYT_RS23270: BPHYT_RS23270 - enoyl-CoA hydratase, at 785,214 to 785,999
_RS23270
BPHYT_RS23275: BPHYT_RS23275 - 3-methylcrotonyl-CoA carboxylase subunit alpha, at 786,081 to 788,159
_RS23275
BPHYT_RS23280: BPHYT_RS23280 - phosphate ABC transporter substrate-binding protein, at 788,183 to 788,974
_RS23280
BPHYT_RS23285: BPHYT_RS23285 - hypothetical protein, at 789,000 to 789,278
_RS23285
Position (kb) 786
787
788
789 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 785.658 kb on + strand, within BPHYT_RS23270 at 786.684 kb on + strand, within BPHYT_RS23275 at 786.747 kb on + strand, within BPHYT_RS23275 at 786.882 kb on + strand, within BPHYT_RS23275 at 787.095 kb on - strand, within BPHYT_RS23275 at 787.391 kb on + strand, within BPHYT_RS23275 at 788.200 kb on - strand at 788.408 kb on - strand, within BPHYT_RS23280 at 788.615 kb on - strand, within BPHYT_RS23280 at 788.635 kb on - strand, within BPHYT_RS23280 at 788.944 kb on + strand at 788.945 kb on - strand at 788.946 kb on + strand at 788.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 785,658 + BPHYT_RS23270 0.56 +1.1 786,684 + BPHYT_RS23275 0.29 +1.6 786,747 + BPHYT_RS23275 0.32 +0.7 786,882 + BPHYT_RS23275 0.39 +0.7 787,095 - BPHYT_RS23275 0.49 +1.5 787,391 + BPHYT_RS23275 0.63 +0.0 788,200 - +0.9 788,408 - BPHYT_RS23280 0.28 +0.5 788,615 - BPHYT_RS23280 0.55 -3.5 788,635 - BPHYT_RS23280 0.57 -0.4 788,944 + +0.4 788,945 - +0.1 788,946 + -1.0 788,947 - +0.1
Or see this region's nucleotide sequence