Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS22435 and BPHYT_RS22440 are separated by 123 nucleotides BPHYT_RS22440 and BPHYT_RS22445 are separated by 10 nucleotides
BPHYT_RS22435: BPHYT_RS22435 - 4-aminobutyrate aminotransferase, at 588,358 to 589,641
_RS22435
BPHYT_RS22440: BPHYT_RS22440 - DNA-binding protein, at 589,765 to 591,270
_RS22440
BPHYT_RS22445: BPHYT_RS22445 - multidrug DMT transporter permease, at 591,281 to 592,117
_RS22445
Position (kb) 589
590
591
592 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 589.111 kb on + strand, within BPHYT_RS22435 at 589.388 kb on + strand, within BPHYT_RS22435 at 589.388 kb on + strand, within BPHYT_RS22435 at 589.389 kb on - strand, within BPHYT_RS22435 at 589.412 kb on + strand, within BPHYT_RS22435 at 589.646 kb on - strand at 589.696 kb on - strand at 589.696 kb on - strand at 589.696 kb on - strand at 589.706 kb on + strand at 589.706 kb on + strand at 589.707 kb on - strand at 589.707 kb on - strand at 589.708 kb on + strand at 589.832 kb on - strand at 589.960 kb on + strand, within BPHYT_RS22440 at 589.961 kb on - strand, within BPHYT_RS22440 at 589.985 kb on - strand, within BPHYT_RS22440 at 589.985 kb on - strand, within BPHYT_RS22440 at 589.985 kb on - strand, within BPHYT_RS22440 at 590.238 kb on + strand, within BPHYT_RS22440 at 590.239 kb on - strand, within BPHYT_RS22440 at 590.275 kb on + strand, within BPHYT_RS22440 at 590.418 kb on - strand, within BPHYT_RS22440 at 590.938 kb on - strand, within BPHYT_RS22440 at 591.050 kb on + strand, within BPHYT_RS22440 at 591.050 kb on + strand, within BPHYT_RS22440 at 591.050 kb on + strand, within BPHYT_RS22440 at 591.051 kb on - strand, within BPHYT_RS22440 at 591.053 kb on + strand, within BPHYT_RS22440 at 591.139 kb on + strand at 591.139 kb on + strand at 591.139 kb on + strand at 591.142 kb on + strand at 591.572 kb on - strand, within BPHYT_RS22445 at 591.652 kb on - strand, within BPHYT_RS22445 at 591.652 kb on - strand, within BPHYT_RS22445 at 591.934 kb on + strand, within BPHYT_RS22445 at 591.935 kb on - strand, within BPHYT_RS22445 at 591.937 kb on - strand, within BPHYT_RS22445 at 591.997 kb on + strand, within BPHYT_RS22445 at 592.000 kb on - strand, within BPHYT_RS22445 at 592.000 kb on - strand, within BPHYT_RS22445 at 592.173 kb on - strand at 592.173 kb on - strand at 592.193 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 589,111 + BPHYT_RS22435 0.59 -0.2 589,388 + BPHYT_RS22435 0.80 -0.6 589,388 + BPHYT_RS22435 0.80 -1.0 589,389 - BPHYT_RS22435 0.80 +1.2 589,412 + BPHYT_RS22435 0.82 -0.4 589,646 - +0.5 589,696 - +1.0 589,696 - +3.2 589,696 - +1.1 589,706 + +2.0 589,706 + -0.9 589,707 - -0.4 589,707 - -0.5 589,708 + +0.5 589,832 - +0.1 589,960 + BPHYT_RS22440 0.13 -0.1 589,961 - BPHYT_RS22440 0.13 +1.6 589,985 - BPHYT_RS22440 0.15 +1.9 589,985 - BPHYT_RS22440 0.15 +0.6 589,985 - BPHYT_RS22440 0.15 +0.2 590,238 + BPHYT_RS22440 0.31 -0.4 590,239 - BPHYT_RS22440 0.31 +2.2 590,275 + BPHYT_RS22440 0.34 -2.7 590,418 - BPHYT_RS22440 0.43 +2.4 590,938 - BPHYT_RS22440 0.78 +0.8 591,050 + BPHYT_RS22440 0.85 -0.7 591,050 + BPHYT_RS22440 0.85 +0.4 591,050 + BPHYT_RS22440 0.85 -1.3 591,051 - BPHYT_RS22440 0.85 -0.3 591,053 + BPHYT_RS22440 0.86 +0.4 591,139 + +0.1 591,139 + +0.1 591,139 + -0.3 591,142 + +0.8 591,572 - BPHYT_RS22445 0.35 +0.8 591,652 - BPHYT_RS22445 0.44 -0.9 591,652 - BPHYT_RS22445 0.44 +1.3 591,934 + BPHYT_RS22445 0.78 -0.7 591,935 - BPHYT_RS22445 0.78 +0.4 591,937 - BPHYT_RS22445 0.78 +1.3 591,997 + BPHYT_RS22445 0.86 +0.5 592,000 - BPHYT_RS22445 0.86 -2.8 592,000 - BPHYT_RS22445 0.86 -1.6 592,173 - +0.1 592,173 - +0.6 592,193 + -1.4
Or see this region's nucleotide sequence