Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21470 and BPHYT_RS21475 are separated by 52 nucleotides BPHYT_RS21475 and BPHYT_RS21480 overlap by 25 nucleotides BPHYT_RS21480 and BPHYT_RS21485 are separated by 73 nucleotides BPHYT_RS21485 and BPHYT_RS21490 are separated by 175 nucleotides
BPHYT_RS21470: BPHYT_RS21470 - 6-hydroxynicotinate reductase, at 376,702 to 378,306
_RS21470
BPHYT_RS21475: BPHYT_RS21475 - hypothetical protein, at 378,359 to 379,297
_RS21475
BPHYT_RS21480: BPHYT_RS21480 - hypothetical protein, at 379,273 to 379,863
_RS21480
BPHYT_RS21485: BPHYT_RS21485 - hypothetical protein, at 379,937 to 380,521
_RS21485
BPHYT_RS21490: BPHYT_RS21490 - ABC transporter permease, at 380,697 to 382,637
_RS21490
Position (kb) 379
380 Strain fitness (log2 ratio) -1
0
1
2 at 378.598 kb on + strand, within BPHYT_RS21475 at 378.599 kb on - strand, within BPHYT_RS21475 at 378.599 kb on - strand, within BPHYT_RS21475 at 378.632 kb on + strand, within BPHYT_RS21475 at 378.633 kb on - strand, within BPHYT_RS21475 at 378.746 kb on + strand, within BPHYT_RS21475 at 379.771 kb on + strand, within BPHYT_RS21480 at 379.772 kb on - strand, within BPHYT_RS21480 at 379.772 kb on - strand, within BPHYT_RS21480 at 379.774 kb on - strand, within BPHYT_RS21480 at 380.048 kb on - strand, within BPHYT_RS21485 at 380.575 kb on + strand at 380.576 kb on - strand at 380.576 kb on - strand at 380.580 kb on + strand at 380.580 kb on + strand at 380.580 kb on + strand at 380.581 kb on - strand at 380.827 kb on - strand at 380.842 kb on - strand at 380.851 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 378,598 + BPHYT_RS21475 0.25 +1.1 378,599 - BPHYT_RS21475 0.26 +0.7 378,599 - BPHYT_RS21475 0.26 -0.3 378,632 + BPHYT_RS21475 0.29 +0.2 378,633 - BPHYT_RS21475 0.29 -0.3 378,746 + BPHYT_RS21475 0.41 -1.0 379,771 + BPHYT_RS21480 0.84 -0.3 379,772 - BPHYT_RS21480 0.84 -1.5 379,772 - BPHYT_RS21480 0.84 +0.6 379,774 - BPHYT_RS21480 0.85 -0.6 380,048 - BPHYT_RS21485 0.19 +0.3 380,575 + +0.3 380,576 - +2.4 380,576 - +0.4 380,580 + +0.7 380,580 + -0.4 380,580 + -0.7 380,581 - -0.8 380,827 - +1.3 380,842 - -0.9 380,851 - -1.0
Or see this region's nucleotide sequence