Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS20930 and BPHYT_RS20935 are separated by 37 nucleotides BPHYT_RS20935 and BPHYT_RS20940 are separated by 146 nucleotides BPHYT_RS20940 and BPHYT_RS20945 are separated by 95 nucleotides BPHYT_RS20945 and BPHYT_RS20950 are separated by 25 nucleotides
BPHYT_RS20930: BPHYT_RS20930 - hypothetical protein, at 257,654 to 257,941
_RS20930
BPHYT_RS20935: BPHYT_RS20935 - dehydrogenase, at 257,979 to 258,413
_RS20935
BPHYT_RS20940: BPHYT_RS20940 - citrate synthase, at 258,560 to 259,804
_RS20940
BPHYT_RS20945: BPHYT_RS20945 - glyoxalase, at 259,900 to 260,289
_RS20945
BPHYT_RS20950: BPHYT_RS20950 - D-galactonate transporter, at 260,315 to 261,631
_RS20950
Position (kb) 258
259
260 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 257.596 kb on + strand at 257.596 kb on + strand at 257.596 kb on + strand at 257.599 kb on + strand at 257.648 kb on + strand at 257.649 kb on - strand at 257.649 kb on - strand at 257.649 kb on - strand at 257.664 kb on - strand at 257.715 kb on - strand, within BPHYT_RS20930 at 257.715 kb on - strand, within BPHYT_RS20930 at 257.981 kb on - strand at 257.988 kb on - strand at 257.988 kb on - strand at 258.037 kb on - strand, within BPHYT_RS20935 at 258.047 kb on + strand, within BPHYT_RS20935 at 258.048 kb on - strand, within BPHYT_RS20935 at 258.275 kb on + strand, within BPHYT_RS20935 at 259.534 kb on - strand, within BPHYT_RS20940 at 259.572 kb on + strand, within BPHYT_RS20940 at 259.596 kb on - strand, within BPHYT_RS20940 at 259.734 kb on + strand at 259.735 kb on - strand at 259.735 kb on - strand at 259.735 kb on - strand at 259.740 kb on + strand at 259.741 kb on - strand at 260.289 kb on + strand at 260.290 kb on - strand at 260.379 kb on - strand at 260.509 kb on - strand, within BPHYT_RS20950 at 260.797 kb on + strand, within BPHYT_RS20950 at 260.798 kb on - strand, within BPHYT_RS20950
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 257,596 + -0.1 257,596 + -2.7 257,596 + -0.4 257,599 + -0.0 257,648 + -0.0 257,649 - +0.2 257,649 - +0.1 257,649 - -0.6 257,664 - -0.5 257,715 - BPHYT_RS20930 0.21 -0.1 257,715 - BPHYT_RS20930 0.21 -2.9 257,981 - +1.6 257,988 - +1.0 257,988 - -0.8 258,037 - BPHYT_RS20935 0.13 +1.2 258,047 + BPHYT_RS20935 0.16 -1.0 258,048 - BPHYT_RS20935 0.16 +0.5 258,275 + BPHYT_RS20935 0.68 -1.4 259,534 - BPHYT_RS20940 0.78 +0.2 259,572 + BPHYT_RS20940 0.81 +0.6 259,596 - BPHYT_RS20940 0.83 -0.7 259,734 + -1.7 259,735 - +1.1 259,735 - +0.2 259,735 - -0.0 259,740 + +1.3 259,741 - +0.7 260,289 + -1.7 260,290 - +0.1 260,379 - -0.1 260,509 - BPHYT_RS20950 0.15 -0.3 260,797 + BPHYT_RS20950 0.37 -0.6 260,798 - BPHYT_RS20950 0.37 -0.1
Or see this region's nucleotide sequence