Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS20845 and BPHYT_RS20850 are separated by 351 nucleotides BPHYT_RS20850 and BPHYT_RS20855 are separated by 126 nucleotides
BPHYT_RS20845: BPHYT_RS20845 - peroxidase, at 239,273 to 239,929
_RS20845
BPHYT_RS20850: BPHYT_RS20850 - multidrug DMT transporter permease, at 240,281 to 241,123
_RS20850
BPHYT_RS20855: BPHYT_RS20855 - transcriptional regulator, at 241,250 to 242,158
_RS20855
Position (kb) 240
241
242 Strain fitness (log2 ratio) -2
-1
0
1
2 at 239.399 kb on + strand, within BPHYT_RS20845 at 239.457 kb on - strand, within BPHYT_RS20845 at 239.934 kb on - strand at 239.942 kb on + strand at 240.069 kb on - strand at 240.069 kb on - strand at 240.069 kb on - strand at 240.155 kb on + strand at 240.156 kb on - strand at 240.190 kb on - strand at 240.460 kb on - strand, within BPHYT_RS20850 at 240.606 kb on + strand, within BPHYT_RS20850 at 240.661 kb on - strand, within BPHYT_RS20850 at 240.661 kb on - strand, within BPHYT_RS20850 at 241.184 kb on + strand at 241.184 kb on + strand at 241.185 kb on - strand at 241.188 kb on + strand at 241.196 kb on - strand at 241.216 kb on - strand at 241.216 kb on - strand at 241.339 kb on - strand at 241.673 kb on + strand, within BPHYT_RS20855 at 241.674 kb on - strand, within BPHYT_RS20855 at 241.709 kb on + strand, within BPHYT_RS20855 at 241.709 kb on + strand, within BPHYT_RS20855 at 241.709 kb on + strand, within BPHYT_RS20855 at 241.710 kb on - strand, within BPHYT_RS20855 at 241.710 kb on - strand, within BPHYT_RS20855 at 241.710 kb on - strand, within BPHYT_RS20855 at 241.715 kb on + strand, within BPHYT_RS20855 at 241.829 kb on - strand, within BPHYT_RS20855 at 241.953 kb on + strand, within BPHYT_RS20855 at 241.954 kb on - strand, within BPHYT_RS20855 at 242.060 kb on + strand, within BPHYT_RS20855 at 242.061 kb on - strand, within BPHYT_RS20855
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 239,399 + BPHYT_RS20845 0.19 -0.9 239,457 - BPHYT_RS20845 0.28 -2.7 239,934 - -0.6 239,942 + -2.7 240,069 - -0.6 240,069 - -1.1 240,069 - -1.4 240,155 + -0.4 240,156 - -0.5 240,190 - +0.2 240,460 - BPHYT_RS20850 0.21 +0.6 240,606 + BPHYT_RS20850 0.39 -2.1 240,661 - BPHYT_RS20850 0.45 +0.0 240,661 - BPHYT_RS20850 0.45 +0.4 241,184 + -0.6 241,184 + +1.2 241,185 - -0.4 241,188 + -1.1 241,196 - -1.3 241,216 - +0.9 241,216 - +0.6 241,339 - +0.4 241,673 + BPHYT_RS20855 0.47 -0.4 241,674 - BPHYT_RS20855 0.47 +1.2 241,709 + BPHYT_RS20855 0.50 -0.4 241,709 + BPHYT_RS20855 0.50 +0.3 241,709 + BPHYT_RS20855 0.50 -0.4 241,710 - BPHYT_RS20855 0.51 -0.3 241,710 - BPHYT_RS20855 0.51 +0.6 241,710 - BPHYT_RS20855 0.51 -0.4 241,715 + BPHYT_RS20855 0.51 -0.3 241,829 - BPHYT_RS20855 0.64 +0.0 241,953 + BPHYT_RS20855 0.77 -1.0 241,954 - BPHYT_RS20855 0.77 +2.4 242,060 + BPHYT_RS20855 0.89 -1.8 242,061 - BPHYT_RS20855 0.89 -0.0
Or see this region's nucleotide sequence