Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS19120 and BPHYT_RS19125 overlap by 4 nucleotides BPHYT_RS19125 and BPHYT_RS19130 overlap by 1 nucleotides BPHYT_RS19130 and BPHYT_RS19135 are separated by 1 nucleotides
BPHYT_RS19120: BPHYT_RS19120 - 3-oxoacyl-ACP synthase, at 4,290,464 to 4,291,528
_RS19120
BPHYT_RS19125: BPHYT_RS19125 - short-chain dehydrogenase, at 4,291,525 to 4,292,289
_RS19125
BPHYT_RS19130: BPHYT_RS19130 - acetyltransferase, at 4,292,289 to 4,292,921
_RS19130
BPHYT_RS19135: BPHYT_RS19135 - Rieske (2Fe-2S) protein, at 4,292,923 to 4,293,912
_RS19135
Position (kb) 4292
4293 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4291.355 kb on + strand, within BPHYT_RS19120 at 4291.363 kb on + strand, within BPHYT_RS19120 at 4291.363 kb on + strand, within BPHYT_RS19120 at 4291.786 kb on - strand, within BPHYT_RS19125 at 4291.893 kb on + strand, within BPHYT_RS19125 at 4291.894 kb on - strand, within BPHYT_RS19125 at 4291.996 kb on + strand, within BPHYT_RS19125 at 4292.276 kb on - strand at 4292.433 kb on + strand, within BPHYT_RS19130 at 4292.467 kb on - strand, within BPHYT_RS19130 at 4292.727 kb on + strand, within BPHYT_RS19130 at 4292.727 kb on + strand, within BPHYT_RS19130 at 4292.727 kb on + strand, within BPHYT_RS19130 at 4292.896 kb on - strand at 4293.075 kb on + strand, within BPHYT_RS19135 at 4293.076 kb on - strand, within BPHYT_RS19135 at 4293.076 kb on - strand, within BPHYT_RS19135 at 4293.105 kb on + strand, within BPHYT_RS19135 at 4293.158 kb on - strand, within BPHYT_RS19135 at 4293.295 kb on + strand, within BPHYT_RS19135 at 4293.295 kb on + strand, within BPHYT_RS19135 at 4293.373 kb on + strand, within BPHYT_RS19135 at 4293.388 kb on + strand, within BPHYT_RS19135 at 4293.389 kb on - strand, within BPHYT_RS19135 at 4293.424 kb on + strand, within BPHYT_RS19135 at 4293.514 kb on + strand, within BPHYT_RS19135 at 4293.598 kb on + strand, within BPHYT_RS19135 at 4293.598 kb on + strand, within BPHYT_RS19135 at 4293.598 kb on + strand, within BPHYT_RS19135 at 4293.599 kb on - strand, within BPHYT_RS19135 at 4293.599 kb on - strand, within BPHYT_RS19135 at 4293.600 kb on + strand, within BPHYT_RS19135 at 4293.600 kb on + strand, within BPHYT_RS19135 at 4293.600 kb on + strand, within BPHYT_RS19135 at 4293.601 kb on - strand, within BPHYT_RS19135 at 4293.601 kb on - strand, within BPHYT_RS19135 at 4293.611 kb on - strand, within BPHYT_RS19135 at 4293.613 kb on - strand, within BPHYT_RS19135 at 4293.613 kb on - strand, within BPHYT_RS19135 at 4293.613 kb on - strand, within BPHYT_RS19135 at 4293.643 kb on + strand, within BPHYT_RS19135 at 4293.644 kb on - strand, within BPHYT_RS19135 at 4293.722 kb on - strand, within BPHYT_RS19135 at 4293.722 kb on - strand, within BPHYT_RS19135 at 4293.803 kb on + strand, within BPHYT_RS19135 at 4293.872 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 4,291,355 + BPHYT_RS19120 0.84 -0.0 4,291,363 + BPHYT_RS19120 0.84 -0.4 4,291,363 + BPHYT_RS19120 0.84 -1.0 4,291,786 - BPHYT_RS19125 0.34 +0.4 4,291,893 + BPHYT_RS19125 0.48 +0.4 4,291,894 - BPHYT_RS19125 0.48 +0.4 4,291,996 + BPHYT_RS19125 0.62 +0.9 4,292,276 - -1.4 4,292,433 + BPHYT_RS19130 0.23 -0.1 4,292,467 - BPHYT_RS19130 0.28 -0.5 4,292,727 + BPHYT_RS19130 0.69 -1.8 4,292,727 + BPHYT_RS19130 0.69 -1.2 4,292,727 + BPHYT_RS19130 0.69 -0.3 4,292,896 - -0.5 4,293,075 + BPHYT_RS19135 0.15 -1.0 4,293,076 - BPHYT_RS19135 0.15 -0.1 4,293,076 - BPHYT_RS19135 0.15 -0.4 4,293,105 + BPHYT_RS19135 0.18 +1.2 4,293,158 - BPHYT_RS19135 0.24 +0.3 4,293,295 + BPHYT_RS19135 0.38 -0.2 4,293,295 + BPHYT_RS19135 0.38 +0.7 4,293,373 + BPHYT_RS19135 0.45 +0.2 4,293,388 + BPHYT_RS19135 0.47 +0.2 4,293,389 - BPHYT_RS19135 0.47 +1.8 4,293,424 + BPHYT_RS19135 0.51 -0.8 4,293,514 + BPHYT_RS19135 0.60 +0.3 4,293,598 + BPHYT_RS19135 0.68 +0.1 4,293,598 + BPHYT_RS19135 0.68 -0.9 4,293,598 + BPHYT_RS19135 0.68 +0.2 4,293,599 - BPHYT_RS19135 0.68 -0.4 4,293,599 - BPHYT_RS19135 0.68 -0.2 4,293,600 + BPHYT_RS19135 0.68 -0.3 4,293,600 + BPHYT_RS19135 0.68 -0.4 4,293,600 + BPHYT_RS19135 0.68 +0.2 4,293,601 - BPHYT_RS19135 0.68 +0.6 4,293,601 - BPHYT_RS19135 0.68 +1.7 4,293,611 - BPHYT_RS19135 0.69 +0.1 4,293,613 - BPHYT_RS19135 0.70 -0.9 4,293,613 - BPHYT_RS19135 0.70 +0.3 4,293,613 - BPHYT_RS19135 0.70 -0.5 4,293,643 + BPHYT_RS19135 0.73 +1.7 4,293,644 - BPHYT_RS19135 0.73 -0.5 4,293,722 - BPHYT_RS19135 0.81 +1.1 4,293,722 - BPHYT_RS19135 0.81 +1.2 4,293,803 + BPHYT_RS19135 0.89 +3.7 4,293,872 - -0.5
Or see this region's nucleotide sequence