Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS19100 and BPHYT_RS19105 overlap by 4 nucleotides BPHYT_RS19105 and BPHYT_RS19110 are separated by 2 nucleotides
BPHYT_RS19100: BPHYT_RS19100 - hypothetical protein, at 4,285,645 to 4,288,017
_RS19100
BPHYT_RS19105: BPHYT_RS19105 - aminotransferase, at 4,288,014 to 4,289,171
_RS19105
BPHYT_RS19110: BPHYT_RS19110 - 3-oxoacyl-ACP synthase, at 4,289,174 to 4,290,214
_RS19110
Position (kb) 4288
4289
4290 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4287.208 kb on + strand, within BPHYT_RS19100 at 4287.327 kb on + strand, within BPHYT_RS19100 at 4287.346 kb on - strand, within BPHYT_RS19100 at 4287.352 kb on + strand, within BPHYT_RS19100 at 4287.352 kb on + strand, within BPHYT_RS19100 at 4287.353 kb on - strand, within BPHYT_RS19100 at 4287.591 kb on + strand, within BPHYT_RS19100 at 4287.592 kb on - strand, within BPHYT_RS19100 at 4287.614 kb on - strand, within BPHYT_RS19100 at 4287.614 kb on - strand, within BPHYT_RS19100 at 4287.669 kb on + strand, within BPHYT_RS19100 at 4287.703 kb on - strand, within BPHYT_RS19100 at 4287.963 kb on - strand at 4288.076 kb on + strand at 4288.077 kb on - strand at 4288.080 kb on + strand at 4288.081 kb on - strand at 4288.081 kb on - strand at 4288.206 kb on + strand, within BPHYT_RS19105 at 4288.309 kb on - strand, within BPHYT_RS19105 at 4288.507 kb on - strand, within BPHYT_RS19105 at 4288.507 kb on - strand, within BPHYT_RS19105 at 4288.960 kb on - strand, within BPHYT_RS19105 at 4288.986 kb on + strand, within BPHYT_RS19105 at 4288.987 kb on - strand, within BPHYT_RS19105 at 4288.987 kb on - strand, within BPHYT_RS19105 at 4288.999 kb on - strand, within BPHYT_RS19105 at 4289.004 kb on + strand, within BPHYT_RS19105 at 4289.004 kb on + strand, within BPHYT_RS19105 at 4289.031 kb on + strand, within BPHYT_RS19105 at 4289.456 kb on + strand, within BPHYT_RS19110 at 4289.456 kb on + strand, within BPHYT_RS19110 at 4289.457 kb on - strand, within BPHYT_RS19110 at 4289.550 kb on - strand, within BPHYT_RS19110 at 4289.550 kb on - strand, within BPHYT_RS19110 at 4289.550 kb on - strand, within BPHYT_RS19110 at 4289.631 kb on - strand, within BPHYT_RS19110 at 4289.639 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.877 kb on - strand, within BPHYT_RS19110
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 4,287,208 + BPHYT_RS19100 0.66 -2.1 4,287,327 + BPHYT_RS19100 0.71 +0.3 4,287,346 - BPHYT_RS19100 0.72 -0.9 4,287,352 + BPHYT_RS19100 0.72 -0.2 4,287,352 + BPHYT_RS19100 0.72 -3.2 4,287,353 - BPHYT_RS19100 0.72 +0.6 4,287,591 + BPHYT_RS19100 0.82 -0.7 4,287,592 - BPHYT_RS19100 0.82 -0.7 4,287,614 - BPHYT_RS19100 0.83 +0.0 4,287,614 - BPHYT_RS19100 0.83 -0.3 4,287,669 + BPHYT_RS19100 0.85 -1.4 4,287,703 - BPHYT_RS19100 0.87 -0.7 4,287,963 - -0.2 4,288,076 + -0.0 4,288,077 - -0.3 4,288,080 + +0.3 4,288,081 - -0.7 4,288,081 - +0.0 4,288,206 + BPHYT_RS19105 0.17 -0.6 4,288,309 - BPHYT_RS19105 0.25 -2.5 4,288,507 - BPHYT_RS19105 0.43 -0.4 4,288,507 - BPHYT_RS19105 0.43 +3.8 4,288,960 - BPHYT_RS19105 0.82 -2.0 4,288,986 + BPHYT_RS19105 0.84 -1.9 4,288,987 - BPHYT_RS19105 0.84 -3.4 4,288,987 - BPHYT_RS19105 0.84 -0.7 4,288,999 - BPHYT_RS19105 0.85 -0.3 4,289,004 + BPHYT_RS19105 0.85 -0.0 4,289,004 + BPHYT_RS19105 0.85 -0.0 4,289,031 + BPHYT_RS19105 0.88 -0.5 4,289,456 + BPHYT_RS19110 0.27 +0.2 4,289,456 + BPHYT_RS19110 0.27 +0.5 4,289,457 - BPHYT_RS19110 0.27 +1.7 4,289,550 - BPHYT_RS19110 0.36 +1.3 4,289,550 - BPHYT_RS19110 0.36 -1.6 4,289,550 - BPHYT_RS19110 0.36 -1.1 4,289,631 - BPHYT_RS19110 0.44 +2.4 4,289,639 + BPHYT_RS19110 0.45 -0.1 4,289,876 + BPHYT_RS19110 0.67 +1.0 4,289,876 + BPHYT_RS19110 0.67 +0.7 4,289,876 + BPHYT_RS19110 0.67 +0.4 4,289,876 + BPHYT_RS19110 0.67 -0.6 4,289,876 + BPHYT_RS19110 0.67 +0.2 4,289,877 - BPHYT_RS19110 0.68 +0.5
Or see this region's nucleotide sequence