Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17385

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,938,580	-				+0.2
3,938,664	-				+1.8
3,938,823	+		BPHYT_RS17380	0.18	-0.2
3,938,823	+		BPHYT_RS17380	0.18	-0.6
3,938,823	+		BPHYT_RS17380	0.18	-1.3
3,938,823	+		BPHYT_RS17380	0.18	-1.3
3,938,824	-		BPHYT_RS17380	0.18	+3.6
3,938,824	-		BPHYT_RS17380	0.18	+0.5
3,938,824	-		BPHYT_RS17380	0.18	-1.7
3,939,078	+		BPHYT_RS17380	0.55	+1.1
3,939,078	+		BPHYT_RS17380	0.55	-3.4
3,939,198	+		BPHYT_RS17380	0.73	-2.3
3,939,198	+		BPHYT_RS17380	0.73	-0.7
3,939,198	+		BPHYT_RS17380	0.73	-2.1
3,939,199	-		BPHYT_RS17380	0.73	-2.1
3,939,199	-		BPHYT_RS17380	0.73	-0.9
3,939,199	-		BPHYT_RS17380	0.73	-1.5
3,939,199	-		BPHYT_RS17380	0.73	-0.5
3,939,381	+				-0.2
3,939,381	+				+0.8
3,939,567	-		BPHYT_RS17385	0.24	+0.4
3,939,567	-		BPHYT_RS17385	0.24	-0.4
3,939,665	+		BPHYT_RS17385	0.37	-0.4
3,939,665	+		BPHYT_RS17385	0.37	-0.4
3,939,665	+		BPHYT_RS17385	0.37	-0.8
3,939,677	+		BPHYT_RS17385	0.39	+0.1
3,939,678	-		BPHYT_RS17385	0.39	+3.8
3,939,710	+		BPHYT_RS17385	0.44	-0.1
3,939,710	+		BPHYT_RS17385	0.44	+0.2
3,939,830	+		BPHYT_RS17385	0.60	+0.9
3,940,013	+		BPHYT_RS17385	0.86	+0.4
3,940,014	-		BPHYT_RS17385	0.86	-2.0
3,940,030	+		BPHYT_RS17385	0.88	+0.0
3,940,030	+		BPHYT_RS17385	0.88	+1.3
3,940,032	+		BPHYT_RS17385	0.88	-0.8
3,940,033	-		BPHYT_RS17385	0.89	+0.6
3,940,033	-		BPHYT_RS17385	0.89	+0.2
3,940,054	+				-1.5
3,940,055	-				+0.0
3,940,055	-				-0.8
3,940,056	+				+0.7
3,940,057	-				-1.7
3,940,161	-				-0.7
3,940,161	-				-1.4
3,940,251	-				-2.5
3,940,398	+				+0.5
3,940,399	-				-2.9
3,940,471	-				-2.7
3,940,581	+				-3.4
3,940,583	+				-2.6
3,940,857	-		BPHYT_RS17390	0.25	-2.6
3,940,857	-		BPHYT_RS17390	0.25	-3.7
3,940,880	+		BPHYT_RS17390	0.27	-3.1
3,940,881	-		BPHYT_RS17390	0.27	-1.8
3,940,995	-		BPHYT_RS17390	0.34	+0.6
3,941,033	+		BPHYT_RS17390	0.37	-4.2
3,941,034	-		BPHYT_RS17390	0.37	-2.8