Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17025

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,859,044	+		BPHYT_RS17020	0.50	-0.8
3,859,212	+		BPHYT_RS17020	0.69	+0.6
3,859,240	+		BPHYT_RS17020	0.72	+0.4
3,859,241	-		BPHYT_RS17020	0.72	+0.0
3,859,241	-		BPHYT_RS17020	0.72	+0.2
3,859,241	-		BPHYT_RS17020	0.72	-2.9
3,859,290	+		BPHYT_RS17020	0.77	+2.2
3,859,293	+		BPHYT_RS17020	0.78	+0.4
3,859,293	+		BPHYT_RS17020	0.78	+0.2
3,859,293	+		BPHYT_RS17020	0.78	+0.6
3,859,294	-		BPHYT_RS17020	0.78	+0.3
3,859,294	-		BPHYT_RS17020	0.78	+0.8
3,859,412	-				+1.0
3,859,412	-				-1.8
3,859,437	-				+0.0
3,859,493	-				-0.6
3,859,493	-				-0.2
3,859,493	-				-0.7
3,859,504	+				+0.3
3,859,504	+				+0.0
3,859,505	-				-1.0
3,859,505	-				+2.6
3,859,542	+				+0.7
3,859,542	+				+0.5
3,859,542	+				-2.4
3,859,649	+				+1.6
3,859,733	+		BPHYT_RS17025	0.14	+4.4
3,860,002	+		BPHYT_RS17025	0.33	+0.3
3,860,003	-		BPHYT_RS17025	0.33	+3.5
3,860,028	+		BPHYT_RS17025	0.35	+0.6
3,860,128	+		BPHYT_RS17025	0.42	-0.4
3,860,563	+		BPHYT_RS17025	0.73	+0.5
3,860,564	-		BPHYT_RS17025	0.73	+1.4
3,860,564	-		BPHYT_RS17025	0.73	+0.1
3,860,587	+		BPHYT_RS17025	0.75	+0.5
3,860,587	+		BPHYT_RS17025	0.75	+0.3
3,860,818	+				+0.3
3,860,941	+				-0.0
3,861,054	+				+0.7
3,861,365	+		BPHYT_RS17030	0.69	+0.8
3,861,515	+				+1.0
3,861,515	+				+2.0
3,861,596	+				+0.2