Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16915

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,835,187	+		BPHYT_RS16910	0.50	-0.8
3,835,188	-		BPHYT_RS16910	0.51	-0.2
3,835,188	-		BPHYT_RS16910	0.51	+0.8
3,835,189	+		BPHYT_RS16910	0.51	-0.6
3,835,190	-		BPHYT_RS16910	0.51	-0.5
3,835,408	+		BPHYT_RS16910	0.71	-0.6
3,835,434	-		BPHYT_RS16910	0.74	-1.5
3,835,712	+				-0.8
3,835,712	+				-1.4
3,835,712	+				-0.8
3,835,712	+				-1.6
3,835,712	+				-1.0
3,835,713	-				+0.1
3,836,072	-		BPHYT_RS16915	0.14	-2.2
3,836,076	+		BPHYT_RS16915	0.14	-1.0
3,836,076	+		BPHYT_RS16915	0.14	+5.0
3,836,077	-		BPHYT_RS16915	0.15	+1.9
3,836,077	-		BPHYT_RS16915	0.15	+0.3
3,836,346	+		BPHYT_RS16915	0.44	-1.2
3,836,347	-		BPHYT_RS16915	0.44	+0.8
3,836,350	-		BPHYT_RS16915	0.45	+0.8
3,836,350	-		BPHYT_RS16915	0.45	+1.1
3,836,350	-		BPHYT_RS16915	0.45	+0.3
3,836,350	-		BPHYT_RS16915	0.45	+0.6
3,836,695	+		BPHYT_RS16915	0.83	+1.0
3,836,695	+		BPHYT_RS16915	0.83	+0.2
3,836,695	+		BPHYT_RS16915	0.83	+0.0
3,836,696	-		BPHYT_RS16915	0.83	+0.6
3,836,696	-		BPHYT_RS16915	0.83	+0.9
3,837,048	+		BPHYT_RS16920	0.25	+3.6
3,837,049	-		BPHYT_RS16920	0.25	+0.9
3,837,049	-		BPHYT_RS16920	0.25	+3.8
3,837,128	+		BPHYT_RS16920	0.35	-0.4
3,837,129	-		BPHYT_RS16920	0.35	+0.3
3,837,129	-		BPHYT_RS16920	0.35	+1.0
3,837,129	-		BPHYT_RS16920	0.35	+0.3
3,837,207	+		BPHYT_RS16920	0.45	-0.6
3,837,249	+		BPHYT_RS16920	0.50	-0.8
3,837,250	-		BPHYT_RS16920	0.51	+0.9
3,837,259	+		BPHYT_RS16920	0.52	+0.4
3,837,259	+		BPHYT_RS16920	0.52	-0.3
3,837,259	+		BPHYT_RS16920	0.52	-1.1
3,837,260	-		BPHYT_RS16920	0.52	-1.4
3,837,759	-				+1.5
3,837,765	-				+0.4
3,837,765	-				-0.6
3,837,765	-				+0.6