Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16875

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,826,389	-		BPHYT_RS16865	0.85	-0.8
3,826,402	+		BPHYT_RS16865	0.88	+1.5
3,826,403	-		BPHYT_RS16865	0.88	+0.2
3,826,452	+				+0.8
3,826,452	+				-1.9
3,826,452	+				+0.6
3,826,452	+				+3.2
3,826,471	+				+2.4
3,826,472	-				+3.2
3,826,514	+				+0.7
3,826,557	+				+0.4
3,826,557	+				+0.0
3,826,557	+				+0.9
3,826,558	-				+1.4
3,826,618	+				-0.3
3,826,810	+				+0.0
3,826,810	+				+0.0
3,826,811	-				+0.2
3,826,865	+				+1.6
3,826,865	-				-0.2
3,826,936	+				+0.1
3,826,937	-				-2.2
3,826,950	+				-0.8
3,826,950	+				+0.2
3,826,950	+				-0.9
3,826,950	+				+1.3
3,826,951	-				-0.1
3,826,951	-				-0.8
3,826,973	+				-0.1
3,826,974	-				-0.2
3,826,993	+				-0.7
3,826,994	-				-0.2
3,827,014	+				-1.2
3,827,044	+				-1.0
3,827,044	+				-0.1
3,827,045	-				+0.2
3,827,045	-				+1.7
3,827,321	+				+0.1
3,827,321	+				-0.6
3,827,322	-				-1.1
3,827,322	-				-0.6
3,827,345	+				+0.4
3,827,346	-				-0.0
3,827,346	-				-1.2
3,827,346	-				-0.4
3,827,346	-				+2.2
3,827,348	+				-0.1
3,827,348	+				-1.0
3,827,349	-				-1.6
3,827,349	-				+1.7
3,827,564	+		BPHYT_RS16875	0.30	+0.4
3,827,581	+		BPHYT_RS16875	0.32	-0.3
3,827,582	-		BPHYT_RS16875	0.32	+0.5
3,827,681	+		BPHYT_RS16875	0.45	+0.3
3,827,682	-		BPHYT_RS16875	0.45	-1.2
3,827,682	-		BPHYT_RS16875	0.45	-0.2
3,827,682	-		BPHYT_RS16875	0.45	-0.5
3,827,682	-		BPHYT_RS16875	0.45	+1.0
3,827,708	+		BPHYT_RS16875	0.48	+1.2
3,827,879	+		BPHYT_RS16875	0.69	+1.3
3,827,879	+		BPHYT_RS16875	0.69	-0.6
3,827,880	-		BPHYT_RS16875	0.69	-2.1
3,827,882	+		BPHYT_RS16875	0.70	-2.8
3,827,883	-		BPHYT_RS16875	0.70	-1.1
3,827,997	+				-0.8
3,828,056	+				-0.7
3,828,056	+				-0.1
3,828,057	-				-0.9
3,828,057	-				+0.2
3,828,057	-				-0.5
3,828,057	-				-0.6
3,828,089	+				+0.1
3,828,090	-				-0.0
3,828,122	+				-0.1
3,828,145	-				+0.1
3,828,145	-				+4.7
3,828,145	-				+1.0
3,828,366	-				-0.2
3,828,944	+		BPHYT_RS16880	0.31	+2.6
3,828,945	-		BPHYT_RS16880	0.31	+1.6