Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15645

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,546,507	-		BPHYT_RS15640	0.45	-2.2
3,546,680	+		BPHYT_RS15640	0.56	-1.4
3,546,681	-		BPHYT_RS15640	0.56	-1.6
3,546,681	-		BPHYT_RS15640	0.56	-2.1
3,546,691	+		BPHYT_RS15640	0.57	-2.2
3,546,806	+		BPHYT_RS15640	0.64	-2.4
3,546,806	+		BPHYT_RS15640	0.64	-3.8
3,546,807	-		BPHYT_RS15640	0.64	-1.2
3,547,101	-		BPHYT_RS15640	0.83	-1.6
3,547,114	-		BPHYT_RS15640	0.83	+0.5
3,547,181	+		BPHYT_RS15640	0.88	-2.5
3,547,185	-		BPHYT_RS15640	0.88	-2.4
3,547,185	-		BPHYT_RS15640	0.88	-4.2
3,547,825	+		BPHYT_RS15645	0.39	-1.4
3,547,825	+		BPHYT_RS15645	0.39	-1.3
3,547,826	-		BPHYT_RS15645	0.40	-1.4
3,547,826	-		BPHYT_RS15645	0.40	-0.7
3,547,826	-		BPHYT_RS15645	0.40	+3.1
3,547,828	-		BPHYT_RS15645	0.40	-1.3
3,547,871	-		BPHYT_RS15645	0.45	-0.9
3,547,931	+		BPHYT_RS15645	0.51	-1.3
3,547,952	-		BPHYT_RS15645	0.54	-1.0
3,548,100	-		BPHYT_RS15645	0.70	-2.2
3,548,100	-		BPHYT_RS15645	0.70	+3.8
3,548,100	-		BPHYT_RS15645	0.70	-1.7
3,548,265	+		BPHYT_RS15645	0.88	-2.8
3,548,311	+				-1.3
3,548,391	+				-1.3
3,548,392	-				-0.5
3,548,631	-		BPHYT_RS15650	0.23	-0.8
3,548,846	-		BPHYT_RS15650	0.42	-1.9
3,548,919	+		BPHYT_RS15650	0.48	-1.8
3,548,919	+		BPHYT_RS15650	0.48	-0.1
3,548,919	+		BPHYT_RS15650	0.48	-1.5
3,548,919	+		BPHYT_RS15650	0.48	-1.1
3,548,919	+		BPHYT_RS15650	0.48	-2.5
3,548,920	-		BPHYT_RS15650	0.48	-2.1
3,548,920	-		BPHYT_RS15650	0.48	-1.5
3,548,920	-		BPHYT_RS15650	0.48	-1.4
3,548,920	-		BPHYT_RS15650	0.48	-0.3
3,549,054	+		BPHYT_RS15650	0.60	-1.1
3,549,055	-		BPHYT_RS15650	0.60	-1.4
3,549,324	+		BPHYT_RS15650	0.84	-1.8
3,549,324	+		BPHYT_RS15650	0.84	-2.4
3,549,325	-		BPHYT_RS15650	0.84	-0.8
3,549,325	-		BPHYT_RS15650	0.84	+1.5
3,549,325	-		BPHYT_RS15650	0.84	-0.5
3,549,325	-		BPHYT_RS15650	0.84	-1.1
3,549,327	+		BPHYT_RS15650	0.84	-2.4
3,549,327	+		BPHYT_RS15650	0.84	-2.5
3,549,328	-		BPHYT_RS15650	0.84	-1.2
3,549,328	-		BPHYT_RS15650	0.84	-1.4
3,549,328	-		BPHYT_RS15650	0.84	-1.8