Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15305

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,475,604	+				-0.9
3,475,622	+		BPHYT_RS15290	0.32	+0.1
3,475,622	+		BPHYT_RS15290	0.32	+1.4
3,475,622	+		BPHYT_RS15290	0.32	-1.4
3,475,676	+				+0.8
3,475,676	+				-0.5
3,475,713	+				+0.5
3,475,733	-				-1.6
3,475,747	+				+1.3
3,475,832	+				+0.1
3,476,302	+		BPHYT_RS15300	0.70	+2.1
3,476,303	-		BPHYT_RS15300	0.71	+0.3
3,476,373	+		BPHYT_RS15300	0.84	-1.0
3,476,565	+				-0.8
3,476,565	+				-2.0
3,476,565	+				-0.9
3,476,777	-				-1.6
3,476,798	-		BPHYT_RS15305	0.10	-2.4
3,476,798	-		BPHYT_RS15305	0.10	-2.4
3,476,798	-		BPHYT_RS15305	0.10	-2.5
3,476,985	+		BPHYT_RS15305	0.18	-0.5
3,476,986	-		BPHYT_RS15305	0.18	-0.9
3,476,986	-		BPHYT_RS15305	0.18	-0.7
3,476,986	-		BPHYT_RS15305	0.18	-1.4
3,476,986	-		BPHYT_RS15305	0.18	-1.3
3,476,986	-		BPHYT_RS15305	0.18	-0.1
3,477,061	+		BPHYT_RS15305	0.21	-1.8
3,477,421	-		BPHYT_RS15305	0.36	-0.3
3,477,537	+		BPHYT_RS15305	0.41	+3.0
3,477,603	+		BPHYT_RS15305	0.44	-3.4
3,477,604	-		BPHYT_RS15305	0.44	-1.7
3,477,604	-		BPHYT_RS15305	0.44	-1.2
3,477,604	-		BPHYT_RS15305	0.44	-1.4
3,477,604	-		BPHYT_RS15305	0.44	-1.0
3,478,442	-		BPHYT_RS15305	0.80	-1.6
3,478,729	-				-1.4
3,478,972	-				-0.1
3,478,972	-				-0.3
3,478,972	-				-1.5
3,478,972	-				+0.6
3,478,972	-				-0.1
3,478,975	+				-0.6
3,478,975	+				-0.6
3,478,976	-				-1.6
3,479,309	+				-0.2
3,479,310	-				+2.1
3,479,310	-				+2.4
3,479,310	-				+2.4
3,479,310	-				+1.7
3,479,310	-				+2.2
3,479,310	-				+2.2
3,479,310	-				+1.6