Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15085

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,431,600	+		BPHYT_RS15080	0.52	+3.8
3,431,601	-		BPHYT_RS15080	0.52	+2.2
3,431,601	-		BPHYT_RS15080	0.52	+1.5
3,431,601	-		BPHYT_RS15080	0.52	+2.6
3,431,687	+		BPHYT_RS15080	0.57	+1.4
3,431,688	-		BPHYT_RS15080	0.57	+1.9
3,431,688	-		BPHYT_RS15080	0.57	+3.3
3,432,203	+		BPHYT_RS15080	0.89	-0.0
3,432,502	+				+2.0
3,432,503	-				+1.8
3,432,621	-				+1.8
3,432,715	+		BPHYT_RS15085	0.14	+2.3
3,432,716	-		BPHYT_RS15085	0.14	+2.7
3,432,971	-		BPHYT_RS15085	0.25	+1.6
3,432,971	-		BPHYT_RS15085	0.25	+2.1
3,432,991	+		BPHYT_RS15085	0.25	+1.5
3,433,074	+		BPHYT_RS15085	0.29	-0.5
3,433,075	-		BPHYT_RS15085	0.29	+1.7
3,433,075	-		BPHYT_RS15085	0.29	+3.1
3,433,100	+		BPHYT_RS15085	0.30	+2.8
3,433,100	+		BPHYT_RS15085	0.30	+1.7
3,433,100	+		BPHYT_RS15085	0.30	+2.8
3,433,100	+		BPHYT_RS15085	0.30	+1.8
3,433,101	-		BPHYT_RS15085	0.30	+1.5
3,433,101	-		BPHYT_RS15085	0.30	+1.9
3,433,270	+		BPHYT_RS15085	0.37	+2.5
3,433,271	-		BPHYT_RS15085	0.37	+1.4
3,433,276	+		BPHYT_RS15085	0.37	+2.5
3,433,305	+		BPHYT_RS15085	0.38	+2.0
3,433,406	-		BPHYT_RS15085	0.43	+1.6
3,433,406	-		BPHYT_RS15085	0.43	+0.7
3,433,408	+		BPHYT_RS15085	0.43	+0.5
3,433,409	-		BPHYT_RS15085	0.43	+0.4
3,433,409	-		BPHYT_RS15085	0.43	+3.4
3,433,521	-		BPHYT_RS15085	0.47	+1.3
3,433,521	-		BPHYT_RS15085	0.47	+1.5
3,433,521	-		BPHYT_RS15085	0.47	+0.9
3,433,576	+		BPHYT_RS15085	0.50	+3.1
3,433,577	-		BPHYT_RS15085	0.50	+1.8
3,433,579	+		BPHYT_RS15085	0.50	+3.1
3,433,817	-		BPHYT_RS15085	0.60	+1.0
3,434,258	-		BPHYT_RS15085	0.78	+1.8
3,434,482	+		BPHYT_RS15085	0.87	+1.8
3,434,866	+				-0.4
3,434,867	-				+1.7
3,434,867	-				+2.6
3,434,867	-				+2.2
3,435,255	+		BPHYT_RS15090	0.37	-1.9
3,435,260	+		BPHYT_RS15090	0.37	-1.9
3,435,594	+		BPHYT_RS15090	0.70	-2.0
3,435,598	+		BPHYT_RS15090	0.71	-2.3
3,435,598	+		BPHYT_RS15090	0.71	-2.9
3,435,599	-		BPHYT_RS15090	0.71	+2.2
3,435,599	-		BPHYT_RS15090	0.71	+2.2
3,435,599	-		BPHYT_RS15090	0.71	+3.1