Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14950

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,399,460	-		BPHYT_RS14945	0.86	-0.4
3,399,628	+				+0.0
3,399,628	+				+0.4
3,399,628	+				-1.3
3,400,045	+				-1.3
3,400,045	+				+0.6
3,400,046	-				+1.4
3,400,046	-				+1.4
3,400,239	+				+0.0
3,400,240	-				+0.2
3,400,240	-				+0.2
3,400,315	-				-0.2
3,400,318	+				+0.1
3,400,318	+				+0.2
3,400,318	+				+0.8
3,400,319	-				-1.2
3,400,319	-				+0.1
3,400,319	-				-0.7
3,400,322	+				+0.7
3,400,322	+				+0.5
3,400,322	+				-1.9
3,400,322	+				-0.6
3,400,323	-				+0.5
3,400,323	-				+1.6
3,400,346	+				+0.7
3,400,357	+				-1.1
3,400,357	+				-0.1
3,400,357	+				-0.8
3,400,357	+				+0.6
3,400,357	+				+0.6
3,400,360	+				+0.7
3,400,361	-				+0.4
3,400,615	+		BPHYT_RS14950	0.64	+1.4
3,400,643	+		BPHYT_RS14950	0.72	-0.5
3,400,644	-		BPHYT_RS14950	0.73	-1.3
3,400,658	+		BPHYT_RS14950	0.77	+0.8
3,400,668	-		BPHYT_RS14950	0.80	+0.3
3,400,668	-		BPHYT_RS14950	0.80	+0.3
3,400,798	+				-2.2
3,400,863	+				-0.1
3,400,863	+				+0.9
3,400,863	+				-1.1
3,400,864	-				-0.2
3,400,864	-				-0.6
3,400,864	-				+0.5
3,400,959	-				-0.3
3,400,959	-				+0.1
3,400,961	+				+0.2
3,400,976	-				-0.4
3,401,057	+				-0.3
3,401,058	-				-0.9
3,401,194	+				-0.9
3,401,298	+				-1.6
3,401,298	+				+0.4
3,401,298	+				+0.2
3,401,299	-				+1.1
3,401,299	-				-0.6
3,401,300	+				+0.3
3,401,300	+				-0.5
3,401,300	+				-0.8
3,401,301	-				-0.0
3,401,301	-				+0.1
3,401,301	-				+0.1
3,401,301	-				+2.4
3,401,351	+		BPHYT_RS14955	0.26	-0.6
3,401,352	-		BPHYT_RS14955	0.27	-0.9
3,401,402	+		BPHYT_RS14955	0.54	+0.1
3,401,403	-		BPHYT_RS14955	0.55	-1.1
3,401,403	-		BPHYT_RS14955	0.55	-1.8
3,401,413	-		BPHYT_RS14955	0.60	-0.0
3,401,457	-		BPHYT_RS14955	0.84	+0.3
3,401,504	+				-0.5
3,401,583	-				-1.5
3,401,607	+		BPHYT_RS14960	0.14	-0.1
3,401,607	+		BPHYT_RS14960	0.14	-0.9
3,401,608	-		BPHYT_RS14960	0.14	+0.0
3,401,610	+		BPHYT_RS14960	0.14	+0.1
3,401,610	+		BPHYT_RS14960	0.14	-0.2
3,401,610	+		BPHYT_RS14960	0.14	+0.2
3,401,610	+		BPHYT_RS14960	0.14	+0.3
3,401,657	-		BPHYT_RS14960	0.23	+0.9