Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14410
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
3,287,314 | - | BPHYT_RS14400 | 0.76 | -3.0 | |
3,287,314 | - | BPHYT_RS14400 | 0.76 | -3.5 | |
3,287,357 | - | BPHYT_RS14400 | 0.83 | -0.8 | |
3,287,479 | + | -3.9 | |||
3,287,479 | + | -1.7 | |||
3,287,480 | - | -2.6 | |||
3,287,480 | - | -1.1 | |||
3,287,485 | + | -3.8 | |||
3,287,485 | + | -5.9 | |||
3,287,486 | - | -0.7 | |||
3,287,514 | - | -1.5 | |||
3,288,193 | - | +0.8 | |||
3,288,193 | - | -1.8 | |||
3,288,218 | - | -0.7 | |||
3,288,218 | - | -0.3 | |||
3,288,324 | + | BPHYT_RS14410 | 0.20 | -0.9 | |
3,288,494 | - | BPHYT_RS14410 | 0.64 | -0.5 | |
3,288,546 | - | BPHYT_RS14410 | 0.77 | -0.0 | |
3,288,583 | + | BPHYT_RS14410 | 0.87 | +0.5 |
Or see this region's nucleotide sequence