Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14255

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,256,306	+		BPHYT_RS14250	0.73	+1.6
3,256,306	+		BPHYT_RS14250	0.73	+1.0
3,256,307	-		BPHYT_RS14250	0.73	+1.4
3,256,307	-		BPHYT_RS14250	0.73	+2.0
3,256,307	-		BPHYT_RS14250	0.73	+1.6
3,256,516	+				+1.9
3,256,516	+				+0.3
3,256,517	-				+0.9
3,256,543	+				+0.7
3,256,544	-				+1.3
3,256,629	+				+0.4
3,256,630	-				-0.7
3,256,630	-				-0.2
3,256,641	+				+0.9
3,256,795	+				+0.6
3,256,795	+				-1.4
3,256,795	+				+2.6
3,256,796	-				-0.0
3,256,830	-				+0.6
3,256,943	-				-2.1
3,257,058	+				+0.3
3,257,059	-				-0.8
3,257,061	-				+2.5
3,257,061	-				+0.2
3,257,103	+				-2.6
3,257,116	+				-1.8
3,257,116	+				-0.3
3,257,136	+				-0.1
3,257,137	-				-0.2
3,257,137	-				+2.5
3,257,196	-				-0.3
3,257,196	-				-0.7
3,257,296	+				+1.1
3,257,296	+				+1.4
3,257,297	-				+1.2
3,257,297	-				+0.7
3,257,297	-				+1.4
3,257,312	+				+2.5
3,257,313	-				+1.1
3,257,313	-				+1.1
3,257,340	+				+1.2
3,257,340	+				+1.6
3,257,341	-				+1.5
3,257,341	-				+0.4
3,257,341	-				+1.0
3,257,454	+				+1.7
3,257,455	-				+1.5
3,257,594	+		BPHYT_RS14255	0.17	+1.2
3,257,594	+		BPHYT_RS14255	0.17	+1.1
3,257,595	-		BPHYT_RS14255	0.17	+1.5
3,257,640	+		BPHYT_RS14255	0.19	+1.1
3,257,641	-		BPHYT_RS14255	0.19	+1.2
3,257,664	+		BPHYT_RS14255	0.21	+0.8
3,257,664	+		BPHYT_RS14255	0.21	+2.1
3,257,664	+		BPHYT_RS14255	0.21	+0.9
3,257,664	+		BPHYT_RS14255	0.21	+1.4
3,257,664	+		BPHYT_RS14255	0.21	+1.3
3,257,664	+		BPHYT_RS14255	0.21	+0.4
3,257,664	+		BPHYT_RS14255	0.21	+1.2
3,257,664	+		BPHYT_RS14255	0.21	+1.4
3,257,665	-		BPHYT_RS14255	0.21	+1.2
3,257,665	-		BPHYT_RS14255	0.21	+1.8
3,257,665	-		BPHYT_RS14255	0.21	+1.3
3,257,665	-		BPHYT_RS14255	0.21	+1.4
3,257,727	+		BPHYT_RS14255	0.24	+1.0
3,257,868	+		BPHYT_RS14255	0.32	+1.3
3,258,277	+		BPHYT_RS14255	0.54	+0.9
3,258,419	+		BPHYT_RS14255	0.62	+1.3
3,258,501	+		BPHYT_RS14255	0.66	+1.6
3,258,600	-		BPHYT_RS14255	0.72	+1.6
3,258,625	-		BPHYT_RS14255	0.73	+1.3
3,258,729	+		BPHYT_RS14255	0.79	+1.3
3,259,060	-				-0.0
3,259,233	+				-0.2
3,259,563	+		BPHYT_RS14260	0.23	-0.3
3,259,563	+		BPHYT_RS14260	0.23	+0.4
3,259,564	-		BPHYT_RS14260	0.23	+0.4
3,259,564	-		BPHYT_RS14260	0.23	-1.1
3,259,564	-		BPHYT_RS14260	0.23	-0.4
3,259,608	+		BPHYT_RS14260	0.26	+0.4
3,259,656	+		BPHYT_RS14260	0.29	-0.3
3,259,671	+		BPHYT_RS14260	0.30	-0.7
3,259,671	+		BPHYT_RS14260	0.30	+1.4
3,259,672	-		BPHYT_RS14260	0.30	-0.7
3,259,672	-		BPHYT_RS14260	0.30	-0.1
3,259,672	-		BPHYT_RS14260	0.30	-0.3
3,259,672	-		BPHYT_RS14260	0.30	-0.4
3,259,756	-		BPHYT_RS14260	0.36	+1.3