Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13595

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,100,251	+		BPHYT_RS13590	0.25	-0.3
3,100,252	-		BPHYT_RS13590	0.25	+2.5
3,100,252	-		BPHYT_RS13590	0.25	+0.2
3,100,332	+		BPHYT_RS13590	0.35	-0.4
3,100,332	+		BPHYT_RS13590	0.35	+0.0
3,100,479	+		BPHYT_RS13590	0.55	+1.1
3,100,486	-		BPHYT_RS13590	0.56	-0.3
3,100,735	-		BPHYT_RS13590	0.88	+0.6
3,100,884	+				-1.5
3,101,147	+		BPHYT_RS13595	0.20	-0.2
3,101,176	-		BPHYT_RS13595	0.24	+2.1
3,101,226	+		BPHYT_RS13595	0.30	+0.7
3,101,265	+		BPHYT_RS13595	0.35	+0.1
3,101,376	+		BPHYT_RS13595	0.48	+1.7
3,101,417	+		BPHYT_RS13595	0.53	+0.6
3,101,417	+		BPHYT_RS13595	0.53	+1.2
3,101,469	+		BPHYT_RS13595	0.59	+1.1
3,101,469	+		BPHYT_RS13595	0.59	+0.3
3,101,542	-		BPHYT_RS13595	0.68	+1.1
3,101,601	+		BPHYT_RS13595	0.75	-0.5
3,101,774	+				+1.3
3,101,780	+				-3.8
3,101,781	-				+0.6
3,101,781	-				+0.8
3,101,834	+				-0.3
3,101,856	-				+1.3
3,102,306	-		BPHYT_RS13600	0.80	-0.2
3,102,350	-		BPHYT_RS13600	0.87	+0.1
3,102,390	-				-0.8
3,102,390	-				+0.7
3,102,474	+				+0.4
3,102,517	+				+3.3
3,102,517	+				-0.7
3,102,519	+				+0.7
3,102,529	-				+0.3
3,102,643	+				-0.3
3,102,761	+				-0.1
3,102,780	+				+0.7
3,102,780	+				+0.3
3,102,781	-				+1.3