Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12870

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,935,687	-				+0.5
2,935,801	+				-0.3
2,936,045	+		BPHYT_RS12870	0.20	-1.4
2,936,045	+		BPHYT_RS12870	0.20	-0.1
2,936,045	+		BPHYT_RS12870	0.20	+0.2
2,936,045	+		BPHYT_RS12870	0.20	-0.3
2,936,046	-		BPHYT_RS12870	0.20	+0.6
2,936,046	-		BPHYT_RS12870	0.20	+1.3
2,936,055	-		BPHYT_RS12870	0.21	-0.5
2,936,135	+		BPHYT_RS12870	0.28	-0.2
2,936,135	+		BPHYT_RS12870	0.28	+1.3
2,936,283	-		BPHYT_RS12870	0.41	+0.6
2,936,438	+		BPHYT_RS12870	0.55	-0.0
2,936,439	-		BPHYT_RS12870	0.55	-0.4
2,936,613	+		BPHYT_RS12870	0.71	+0.3
2,936,846	+				-1.7
2,936,846	+				+0.2
2,936,847	-				+0.3
2,936,858	+				-1.4
2,936,902	-				-3.1
2,936,944	+				+0.1
2,937,158	+				+0.4
2,937,159	-				+2.0
2,937,161	-				+1.6
2,937,182	+				-0.1
2,937,637	-		BPHYT_RS12875	0.18	+0.2
2,937,816	-		BPHYT_RS12875	0.26	+0.6
2,937,821	+		BPHYT_RS12875	0.26	+1.0
2,937,821	+		BPHYT_RS12875	0.26	-0.7
2,937,821	+		BPHYT_RS12875	0.26	+2.7
2,937,822	-		BPHYT_RS12875	0.26	+1.3
2,937,822	-		BPHYT_RS12875	0.26	-0.3
2,937,920	+		BPHYT_RS12875	0.31	+1.4