Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12510
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,853,813 | - | -0.7 | |||
2,853,842 | + | -0.3 | |||
2,853,872 | + | +0.4 | |||
2,853,873 | - | -0.7 | |||
2,853,954 | + | +0.6 | |||
2,853,955 | - | +1.1 | |||
2,854,005 | - | -2.5 | |||
2,854,198 | - | +1.1 | |||
2,854,198 | - | +1.1 | |||
2,854,274 | - | BPHYT_RS12510 | 0.11 | +0.9 | |
2,854,641 | + | BPHYT_RS12510 | 0.27 | -1.2 | |
2,855,019 | - | BPHYT_RS12510 | 0.43 | -3.0 | |
2,856,351 | + | +0.1 |
Or see this region's nucleotide sequence