Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12305

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,809,278	+				+1.4
2,809,339	+				+2.8
2,809,532	+		BPHYT_RS12300	0.19	-0.3
2,809,533	-		BPHYT_RS12300	0.19	+1.7
2,809,533	-		BPHYT_RS12300	0.19	+0.2
2,809,533	-		BPHYT_RS12300	0.19	+0.1
2,809,685	+		BPHYT_RS12300	0.38	+0.2
2,809,881	+		BPHYT_RS12300	0.62	+2.7
2,809,881	+		BPHYT_RS12300	0.62	+2.0
2,809,881	+		BPHYT_RS12300	0.62	+2.9
2,809,882	-		BPHYT_RS12300	0.62	-0.3
2,809,925	+		BPHYT_RS12300	0.67	-0.9
2,810,676	+		BPHYT_RS12305	0.25	-1.0
2,810,695	-		BPHYT_RS12305	0.26	+0.2
2,810,752	+		BPHYT_RS12305	0.29	-2.2
2,810,752	+		BPHYT_RS12305	0.29	-0.3
2,810,753	-		BPHYT_RS12305	0.29	-1.0
2,810,920	+		BPHYT_RS12305	0.40	-0.2
2,810,921	-		BPHYT_RS12305	0.40	+0.3
2,810,921	-		BPHYT_RS12305	0.40	-0.7
2,811,096	+		BPHYT_RS12305	0.51	-0.3
2,811,096	+		BPHYT_RS12305	0.51	+0.2
2,811,096	+		BPHYT_RS12305	0.51	-0.1
2,811,485	+		BPHYT_RS12305	0.75	+0.4
2,811,485	+		BPHYT_RS12305	0.75	+0.1
2,811,578	-		BPHYT_RS12305	0.81	+0.6
2,811,578	-		BPHYT_RS12305	0.81	+1.0
2,811,578	-		BPHYT_RS12305	0.81	+0.8
2,811,800	-				+1.3
2,811,800	-				-0.3
2,811,959	+				+1.9
2,811,960	-				-0.0
2,812,021	-				-0.2
2,812,021	-				-0.5
2,812,021	-				-0.6
2,812,448	-				-0.3