Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12285

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,805,693	+				-0.1
2,805,693	+				+1.2
2,805,693	+				-1.1
2,805,697	+				+1.3
2,805,698	-				+2.2
2,805,698	-				+0.8
2,805,698	-				+1.9
2,805,711	+				+1.9
2,806,131	+				-2.3
2,806,232	+				+0.3
2,806,233	-				+0.7
2,806,233	-				+0.7
2,806,233	-				-0.5
2,806,409	+		BPHYT_RS12285	0.20	+0.7
2,806,583	+		BPHYT_RS12285	0.33	+0.7
2,806,584	-		BPHYT_RS12285	0.33	+0.2
2,806,593	-		BPHYT_RS12285	0.34	-0.2
2,806,593	-		BPHYT_RS12285	0.34	-1.4
2,806,931	+		BPHYT_RS12285	0.60	+0.0
2,806,932	-		BPHYT_RS12285	0.60	-0.0
2,806,988	+		BPHYT_RS12285	0.64	+0.3
2,807,178	-		BPHYT_RS12285	0.78	-2.8
2,807,178	-		BPHYT_RS12285	0.78	+0.2
2,807,222	+		BPHYT_RS12285	0.82	+0.4
2,807,222	+		BPHYT_RS12285	0.82	+1.5
2,807,494	+				+0.6
2,807,494	+				-0.1
2,807,494	+				+1.4
2,807,495	-				+0.4
2,807,504	-				-1.7
2,807,715	+				+1.6
2,807,737	+				-0.7
2,807,738	-				-0.7
2,807,738	-				+0.7
2,807,738	-				+1.4
2,807,859	+		BPHYT_RS12290	0.35	+1.4
2,808,012	+		BPHYT_RS12290	0.70	+1.1
2,808,223	+				+1.6
2,808,224	-				-1.3
2,808,335	+				+1.4
2,808,335	+				+1.3
2,808,350	+				+0.7
2,808,350	+				+0.5
2,808,350	+				+1.0
2,808,354	+				+1.8
2,808,354	+				+1.2
2,808,354	+				+3.9
2,808,355	-				-0.2
2,808,355	-				+0.5
2,808,355	-				-0.1
2,808,355	-				+0.5
2,808,355	-				+0.4