Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11790
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
|---|---|---|---|---|---|
| remove | |||||
| 2,673,495 | + | -0.1 | |||
| 2,673,827 | + | BPHYT_RS11790 | 0.32 | +0.3 | |
| 2,673,829 | + | BPHYT_RS11790 | 0.32 | -3.2 | |
| 2,673,830 | - | BPHYT_RS11790 | 0.32 | -1.5 | |
| 2,674,302 | - | BPHYT_RS11790 | 0.68 | +0.5 | |
| 2,675,047 | - | BPHYT_RS11795 | 0.72 | +0.4 | |
| 2,675,463 | - | BPHYT_RS11800 | 0.20 | +0.7 | |
| 2,675,463 | - | BPHYT_RS11800 | 0.20 | -0.0 | |
| 2,675,654 | + | BPHYT_RS11800 | 0.32 | -1.4 | |
| 2,675,688 | - | BPHYT_RS11800 | 0.34 | +0.2 |
Or see this region's nucleotide sequence