Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS11760 and BPHYT_RS11765 are separated by 26 nucleotides BPHYT_RS11765 and BPHYT_RS11770 are separated by 63 nucleotides BPHYT_RS11770 and BPHYT_RS11775 are separated by 134 nucleotides
BPHYT_RS11760: BPHYT_RS11760 - polyamine ABC transporter substrate-binding protein, at 2,667,235 to 2,668,488
_RS11760
BPHYT_RS11765: BPHYT_RS11765 - polyamine ABC transporter permease, at 2,668,515 to 2,669,327
_RS11765
BPHYT_RS11770: BPHYT_RS11770 - hypothetical protein, at 2,669,391 to 2,669,822
_RS11770
BPHYT_RS11775: BPHYT_RS11775 - AraC family transcriptional regulator, at 2,669,957 to 2,671,009
_RS11775
Position (kb)
2668
2669
2670 Strain fitness (log2 ratio)
-2
-1
0
1 at 2667.944 kb on + strand, within BPHYT_RS11760 at 2667.998 kb on - strand, within BPHYT_RS11760 at 2668.127 kb on - strand, within BPHYT_RS11760 at 2668.174 kb on + strand, within BPHYT_RS11760 at 2668.301 kb on - strand, within BPHYT_RS11760 at 2668.412 kb on - strand at 2668.578 kb on - strand at 2668.578 kb on - strand at 2669.083 kb on + strand, within BPHYT_RS11765 at 2669.915 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 2,667,944 + BPHYT_RS11760 0.57 -0.4 2,667,998 - BPHYT_RS11760 0.61 +0.0 2,668,127 - BPHYT_RS11760 0.71 +0.2 2,668,174 + BPHYT_RS11760 0.75 +0.7 2,668,301 - BPHYT_RS11760 0.85 -0.7 2,668,412 - -1.1 2,668,578 - -0.8 2,668,578 - +0.1 2,669,083 + BPHYT_RS11765 0.70 -1.8 2,669,915 + -0.1
Or see this region's nucleotide sequence