Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11535

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,621,689	+				-0.2
2,621,689	+				-2.5
2,621,689	+				-0.9
2,621,741	-				+0.1
2,621,799	+				-0.8
2,621,799	+				+0.0
2,621,800	-				-0.0
2,621,844	-				-0.0
2,621,885	-				-0.8
2,621,925	-				-3.4
2,622,274	+		BPHYT_RS11530	0.84	-2.8
2,622,282	-		BPHYT_RS11530	0.86	-1.0
2,622,307	+				-3.3
2,622,308	-				-1.3
2,622,627	-				-0.9
2,622,681	-				-0.6
2,622,993	+		BPHYT_RS11535	0.27	-0.5
2,623,081	-		BPHYT_RS11535	0.35	-1.6
2,623,143	+		BPHYT_RS11535	0.40	-0.9
2,623,422	+		BPHYT_RS11535	0.63	-0.8
2,623,753	-				+0.3
2,623,860	+				-1.8
2,623,861	-				-0.6
2,623,985	-				-1.7
2,624,020	-				+0.1
2,624,080	+				+0.1
2,624,081	-				+0.9
2,624,127	+				+1.1
2,624,129	+				+2.0
2,624,130	-				-3.0
2,624,130	-				-0.9
2,624,130	-				-1.1
2,624,212	+				-0.4
2,624,363	+		BPHYT_RS11540	0.13	-0.6
2,624,400	-		BPHYT_RS11540	0.20	+0.5
2,624,539	+		BPHYT_RS11540	0.47	+0.5
2,624,540	-		BPHYT_RS11540	0.47	-3.3