Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS11480 and BPHYT_RS11485 are separated by 83 nucleotides BPHYT_RS11485 and BPHYT_RS11490 are separated by 171 nucleotides BPHYT_RS11490 and BPHYT_RS11495 are separated by 133 nucleotides
BPHYT_RS11480: BPHYT_RS11480 - heme ABC transporter ATP-binding protein, at 2,610,633 to 2,612,225
_RS11480
BPHYT_RS11485: BPHYT_RS11485 - 6-phosphogluconate dehydrogenase, at 2,612,309 to 2,613,376
_RS11485
BPHYT_RS11490: BPHYT_RS11490 - hypothetical protein, at 2,613,548 to 2,613,754
_RS11490
BPHYT_RS11495: BPHYT_RS11495 - membrane protein, at 2,613,888 to 2,614,994
_RS11495
Position (kb)
2612
2613
2614 Strain fitness (log2 ratio)
-1
0
1 at 2611.507 kb on + strand, within BPHYT_RS11480 at 2611.529 kb on - strand, within BPHYT_RS11480 at 2612.169 kb on - strand at 2612.169 kb on - strand at 2612.208 kb on - strand at 2612.948 kb on + strand, within BPHYT_RS11485 at 2613.167 kb on + strand, within BPHYT_RS11485 at 2613.443 kb on + strand at 2613.509 kb on + strand at 2613.563 kb on + strand at 2613.563 kb on + strand at 2613.922 kb on + strand at 2613.923 kb on - strand at 2613.923 kb on - strand at 2614.193 kb on - strand, within BPHYT_RS11495 at 2614.193 kb on - strand, within BPHYT_RS11495
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 2,611,507 + BPHYT_RS11480 0.55 -1.2 2,611,529 - BPHYT_RS11480 0.56 -0.6 2,612,169 - -0.2 2,612,169 - -0.5 2,612,208 - -0.7 2,612,948 + BPHYT_RS11485 0.60 +0.9 2,613,167 + BPHYT_RS11485 0.80 +0.5 2,613,443 + +0.9 2,613,509 + -1.0 2,613,563 + -0.9 2,613,563 + +0.5 2,613,922 + -0.8 2,613,923 - -0.4 2,613,923 - -0.6 2,614,193 - BPHYT_RS11495 0.28 +0.1 2,614,193 - BPHYT_RS11495 0.28 -0.1
Or see this region's nucleotide sequence