Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10160
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,311,942 | + | BPHYT_RS10155 | 0.52 | +0.9 | |
2,312,162 | - | BPHYT_RS10155 | 0.69 | -0.3 | |
2,312,170 | + | BPHYT_RS10155 | 0.69 | +0.2 | |
2,312,172 | + | BPHYT_RS10155 | 0.69 | +3.1 | |
2,312,173 | - | BPHYT_RS10155 | 0.69 | -0.9 | |
2,312,442 | + | +0.2 | |||
2,314,137 | + | BPHYT_RS10160 | 0.47 | +0.0 | |
2,314,926 | + | BPHYT_RS10160 | 0.77 | +0.5 | |
2,315,404 | - | +0.7 | |||
2,315,511 | + | +1.0 | |||
2,315,511 | + | -0.2 | |||
2,315,512 | - | +0.3 | |||
2,315,512 | - | -0.9 | |||
2,315,640 | - | +0.0 | |||
2,315,640 | - | -0.4 | |||
2,315,660 | - | +1.9 | |||
2,315,727 | + | +0.7 | |||
2,315,728 | - | +0.4 | |||
2,315,728 | - | -1.2 | |||
2,316,232 | + | BPHYT_RS10165 | 0.46 | +0.8 | |
2,316,276 | + | BPHYT_RS10165 | 0.56 | +0.5 |
Or see this region's nucleotide sequence