Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10040
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,286,525 | + | BPHYT_RS10035 | 0.88 | +0.5 | |
2,286,859 | + | +0.5 | |||
2,286,944 | + | -0.5 | |||
2,286,944 | + | +0.3 | |||
2,286,945 | - | -0.1 | |||
2,286,945 | - | -0.0 | |||
2,287,070 | + | -0.3 | |||
2,287,206 | + | BPHYT_RS10040 | 0.62 | -2.1 | |
2,287,416 | + | -1.0 | |||
2,287,904 | - | BPHYT_RS10045 | 0.70 | -0.9 |
Or see this region's nucleotide sequence