Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09555

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,166,532	+		BPHYT_RS09550	0.70	-1.2
2,166,533	-		BPHYT_RS09550	0.70	-1.0
2,166,632	+		BPHYT_RS09550	0.77	-0.4
2,166,632	+		BPHYT_RS09550	0.77	-1.0
2,166,633	-		BPHYT_RS09550	0.77	-0.3
2,166,721	+		BPHYT_RS09550	0.82	-0.2
2,167,025	+				-0.1
2,167,058	+				+0.5
2,167,059	-				+0.9
2,167,062	+				-0.5
2,167,062	+				-0.6
2,167,063	-				-2.8
2,167,189	-				-0.2
2,167,318	+				+0.4
2,167,321	-				+0.2
2,167,321	-				-0.7
2,167,321	-				-0.3
2,167,324	+				-3.4
2,167,325	-				-0.2
2,167,441	+		BPHYT_RS09555	0.15	+2.1
2,167,441	+		BPHYT_RS09555	0.15	+0.5
2,167,513	+		BPHYT_RS09555	0.19	+1.3
2,167,514	-		BPHYT_RS09555	0.19	+1.2
2,167,514	-		BPHYT_RS09555	0.19	+0.6
2,167,670	-		BPHYT_RS09555	0.29	-0.4
2,167,670	-		BPHYT_RS09555	0.29	-1.0
2,167,703	-		BPHYT_RS09555	0.30	-0.2
2,167,739	-		BPHYT_RS09555	0.33	+1.5
2,167,739	-		BPHYT_RS09555	0.33	+0.0
2,168,004	+		BPHYT_RS09555	0.48	-0.7
2,168,031	-		BPHYT_RS09555	0.50	-0.8
2,168,287	+		BPHYT_RS09555	0.65	-0.7
2,168,288	-		BPHYT_RS09555	0.65	+0.4
2,168,790	-				-0.2
2,169,047	+				+0.4
2,169,048	-				+0.4
2,169,369	-		BPHYT_RS09560	0.16	-1.1
2,169,734	-		BPHYT_RS09560	0.34	-2.3