Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09405

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,128,694	+		BPHYT_RS09400	0.23	+0.7
2,128,860	-		BPHYT_RS09400	0.39	+0.3
2,128,860	-				+1.1
2,128,868	+		BPHYT_RS09400	0.39	+1.8
2,128,868	+		BPHYT_RS09400	0.39	+1.4
2,129,062	+		BPHYT_RS09400	0.57	-0.7
2,129,062	+		BPHYT_RS09400	0.57	+1.1
2,129,063	-		BPHYT_RS09400	0.57	+1.7
2,129,273	+		BPHYT_RS09400	0.77	+1.3
2,129,273	+		BPHYT_RS09400	0.77	+1.3
2,129,274	-		BPHYT_RS09400	0.77	+1.2
2,129,770	+		BPHYT_RS09405	0.18	+4.5
2,129,770	+		BPHYT_RS09405	0.18	+1.1
2,129,771	-		BPHYT_RS09405	0.18	+1.5
2,129,771	-		BPHYT_RS09405	0.18	+1.3
2,129,789	+		BPHYT_RS09405	0.19	+0.9
2,130,110	+		BPHYT_RS09405	0.50	+0.6
2,130,111	-		BPHYT_RS09405	0.50	+3.1
2,130,347	+		BPHYT_RS09405	0.72	+2.1
2,130,421	-		BPHYT_RS09405	0.79	+3.1
2,130,533	+		BPHYT_RS09405	0.89	+1.7
2,130,534	-		BPHYT_RS09405	0.89	+2.0
2,130,700	+				+1.5
2,130,701	-				+1.0
2,130,753	+				+2.1
2,130,771	-				+0.6
2,130,856	+				+1.1
2,131,187	-		BPHYT_RS09410	0.39	+0.4
2,131,247	+		BPHYT_RS09410	0.46	+1.0
2,131,248	-		BPHYT_RS09410	0.46	+2.0
2,131,472	+		BPHYT_RS09410	0.69	+1.6
2,131,604	+		BPHYT_RS09410	0.82	+0.5
2,131,612	-		BPHYT_RS09410	0.83	+2.3