Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09400

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,127,523	+				+0.8
2,127,523	+				+1.4
2,127,537	+				+0.8
2,127,718	+		BPHYT_RS09395	0.15	-1.2
2,128,261	+		BPHYT_RS09395	0.77	+1.0
2,128,262	-		BPHYT_RS09395	0.78	+0.3
2,128,694	+		BPHYT_RS09400	0.23	+0.7
2,128,860	-		BPHYT_RS09400	0.39	+0.3
2,128,860	-				+1.1
2,128,868	+		BPHYT_RS09400	0.39	+1.8
2,128,868	+		BPHYT_RS09400	0.39	+1.4
2,129,062	+		BPHYT_RS09400	0.57	-0.7
2,129,062	+		BPHYT_RS09400	0.57	+1.1
2,129,063	-		BPHYT_RS09400	0.57	+1.7
2,129,273	+		BPHYT_RS09400	0.77	+1.3
2,129,273	+		BPHYT_RS09400	0.77	+1.3
2,129,274	-		BPHYT_RS09400	0.77	+1.2
2,129,770	+		BPHYT_RS09405	0.18	+4.5
2,129,770	+		BPHYT_RS09405	0.18	+1.1
2,129,771	-		BPHYT_RS09405	0.18	+1.5
2,129,771	-		BPHYT_RS09405	0.18	+1.3
2,129,789	+		BPHYT_RS09405	0.19	+0.9
2,130,110	+		BPHYT_RS09405	0.50	+0.6
2,130,111	-		BPHYT_RS09405	0.50	+3.1
2,130,347	+		BPHYT_RS09405	0.72	+2.1
2,130,421	-		BPHYT_RS09405	0.79	+3.1