Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09155

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
2,071,606	+		BPHYT_RS09150	0.38	-2.4
2,071,615	+		BPHYT_RS09150	0.39	+0.0
2,071,987	+		BPHYT_RS09150	0.71	+0.3
2,071,987	+		BPHYT_RS09150	0.71	+0.6
2,071,987	+		BPHYT_RS09150	0.71	+0.2
2,072,289	+				-0.1
2,072,290	-				-2.7
2,072,290	-				-0.8
2,072,511	+				+2.2
2,072,512	-				-0.3
2,072,535	+				+3.5
2,072,535	+				+3.3
2,072,598	+		BPHYT_RS09155	0.11	+2.9
2,072,789	+		BPHYT_RS09155	0.37	+3.0
2,072,973	+		BPHYT_RS09155	0.62	+2.4
2,072,973	+		BPHYT_RS09155	0.62	+3.6
2,072,973	+		BPHYT_RS09155	0.62	+3.5
2,073,069	+		BPHYT_RS09155	0.74	+4.0
2,073,248	+				+1.3
2,073,367	-				-1.0
2,073,386	+				-2.1
2,073,397	+				-2.6
2,073,397	+				-0.8
2,073,398	-				+0.3
2,073,474	-		BPHYT_RS09160	0.13	+0.4
2,073,474	-		BPHYT_RS09160	0.13	+0.4
2,073,474	-		BPHYT_RS09160	0.13	+0.1
2,073,650	+		BPHYT_RS09160	0.41	-1.0
2,073,684	-		BPHYT_RS09160	0.47	-1.2
2,073,752	+		BPHYT_RS09160	0.58	-2.1
2,073,836	+		BPHYT_RS09160	0.71	+1.0
2,073,836	+		BPHYT_RS09160	0.71	-0.2
2,073,837	-		BPHYT_RS09160	0.71	-2.5
2,073,837	-		BPHYT_RS09160	0.71	+0.3
2,074,016	+				+0.1
2,074,149	+				+0.4
2,074,149	+				-0.7
2,074,150	-				-3.1