Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08575

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
1,959,246	+		BPHYT_RS08570	0.15	-2.3
1,959,247	-		BPHYT_RS08570	0.16	+0.1
1,959,292	-		BPHYT_RS08570	0.21	-0.1
1,959,292	-		BPHYT_RS08570	0.21	-1.7
1,959,331	-		BPHYT_RS08570	0.26	-1.2
1,959,331	-		BPHYT_RS08570	0.26	+0.2
1,959,340	-		BPHYT_RS08570	0.27	-0.1
1,959,525	+		BPHYT_RS08570	0.49	-1.3
1,959,525	+		BPHYT_RS08570	0.49	-0.5
1,959,588	+		BPHYT_RS08570	0.57	+0.1
1,959,588	+		BPHYT_RS08570	0.57	+1.2
1,959,597	+		BPHYT_RS08570	0.58	+2.6
1,959,598	-		BPHYT_RS08570	0.58	-0.5
1,959,796	-		BPHYT_RS08570	0.82	-0.6
1,959,861	+				-0.9
1,959,968	-				+0.2
1,960,217	+		BPHYT_RS08575	0.22	-1.6
1,960,218	-		BPHYT_RS08575	0.22	-0.0
1,960,241	+		BPHYT_RS08575	0.25	-1.1
1,960,338	+		BPHYT_RS08575	0.38	-0.9
1,960,413	+		BPHYT_RS08575	0.48	-0.4
1,960,414	-		BPHYT_RS08575	0.48	-1.6
1,960,645	-		BPHYT_RS08575	0.80	-0.3
1,960,953	-		BPHYT_RS08580	0.27	+2.5
1,961,007	+		BPHYT_RS08580	0.37	+2.6
1,961,007	+		BPHYT_RS08580	0.37	+3.2
1,961,007	+		BPHYT_RS08580	0.37	+2.8
1,961,008	-		BPHYT_RS08580	0.37	-1.4
1,961,008	-		BPHYT_RS08580	0.37	+2.2
1,961,250	+		BPHYT_RS08580	0.82	+3.6
1,961,374	+				+1.7
1,961,382	+				-0.8
1,961,595	+				-0.5
1,961,618	+				-1.0