Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08565

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
1,957,164	+		BPHYT_RS08560	0.25	+0.3
1,957,227	+		BPHYT_RS08560	0.33	+0.9
1,957,291	-		BPHYT_RS08560	0.41	-0.1
1,957,393	-		BPHYT_RS08560	0.54	+1.7
1,957,393	-		BPHYT_RS08560	0.54	+0.8
1,957,399	-				+1.2
1,957,399	-		BPHYT_RS08560	0.55	+0.0
1,957,801	+				+1.0
1,957,923	+				+1.5
1,958,513	-		BPHYT_RS08565	0.54	-3.0
1,959,027	-				-0.9
1,959,246	+		BPHYT_RS08570	0.15	-2.3
1,959,247	-		BPHYT_RS08570	0.16	+0.1
1,959,292	-		BPHYT_RS08570	0.21	-0.1
1,959,292	-		BPHYT_RS08570	0.21	-1.7
1,959,331	-		BPHYT_RS08570	0.26	-1.2
1,959,331	-		BPHYT_RS08570	0.26	+0.2
1,959,340	-		BPHYT_RS08570	0.27	-0.1
1,959,525	+		BPHYT_RS08570	0.49	-1.3
1,959,525	+		BPHYT_RS08570	0.49	-0.5
1,959,588	+		BPHYT_RS08570	0.57	+0.1
1,959,588	+		BPHYT_RS08570	0.57	+1.2
1,959,597	+		BPHYT_RS08570	0.58	+2.6
1,959,598	-		BPHYT_RS08570	0.58	-0.5
1,959,796	-		BPHYT_RS08570	0.82	-0.6
1,959,861	+				-0.9
1,959,968	-				+0.2