Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08330

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
1,904,825	+		BPHYT_RS08325	0.86	+0.2
1,904,825	+		BPHYT_RS08325	0.86	+0.7
1,904,825	+		BPHYT_RS08325	0.86	-2.0
1,904,996	+				+0.3
1,905,081	-				-1.2
1,905,168	-				+0.9
1,905,334	-				+0.4
1,905,386	-				-0.6
1,905,412	-				-0.6
1,905,690	-				+1.9
1,906,030	+				-0.6
1,906,031	-				+1.0
1,906,612	+		BPHYT_RS08330	0.20	-1.4
1,906,613	-		BPHYT_RS08330	0.20	+0.2
1,906,613	-		BPHYT_RS08330	0.20	-0.2
1,907,503	+		BPHYT_RS08330	0.36	+1.2
1,907,756	-		BPHYT_RS08330	0.40	-2.7
1,907,824	+		BPHYT_RS08330	0.42	-0.5
1,907,995	+		BPHYT_RS08330	0.45	-1.1
1,908,238	+		BPHYT_RS08330	0.49	+1.6
1,908,441	-		BPHYT_RS08330	0.53	-2.5
1,908,971	-		BPHYT_RS08330	0.63	+0.2
1,909,226	-		BPHYT_RS08330	0.67	-0.3
1,909,229	+		BPHYT_RS08330	0.67	-0.0
1,909,229	+		BPHYT_RS08330	0.67	+0.2
1,909,484	+		BPHYT_RS08330	0.72	-0.6
1,909,715	-		BPHYT_RS08330	0.76	-2.1
1,909,790	-		BPHYT_RS08330	0.77	+0.6
1,909,962	+		BPHYT_RS08330	0.81	-1.3
1,910,053	-		BPHYT_RS08330	0.82	-0.8
1,911,347	+		BPHYT_RS08335	0.65	-0.2
1,911,763	+		BPHYT_RS08340	0.15	-2.3