Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06520

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
1,480,676	+		BPHYT_RS06515	0.30	-1.9
1,480,716	-		BPHYT_RS06515	0.34	+0.3
1,481,028	-		BPHYT_RS06515	0.64	-1.0
1,481,028	-		BPHYT_RS06515	0.64	-0.7
1,481,028	-		BPHYT_RS06515	0.64	+0.4
1,481,067	-		BPHYT_RS06515	0.68	-0.8
1,481,067	-		BPHYT_RS06515	0.68	-1.3
1,481,194	-		BPHYT_RS06515	0.81	+0.8
1,481,410	-				-0.4
1,481,432	+				-0.5
1,481,433	-				+0.9
1,481,489	+				-2.7
1,481,513	+				-1.7
1,481,564	+		BPHYT_RS06520	0.14	-1.3
1,481,587	+		BPHYT_RS06520	0.17	-0.4
1,481,711	+		BPHYT_RS06520	0.30	-3.1
1,481,792	+		BPHYT_RS06520	0.38	-2.3
1,481,978	+		BPHYT_RS06520	0.58	-1.7
1,481,978	+		BPHYT_RS06520	0.58	-0.2
1,481,979	-		BPHYT_RS06520	0.58	-0.2
1,482,083	-		BPHYT_RS06520	0.69	+0.5
1,482,098	+		BPHYT_RS06520	0.71	+0.2
1,482,099	-		BPHYT_RS06520	0.71	+0.3
1,482,099	-		BPHYT_RS06520	0.71	+0.4
1,482,105	-		BPHYT_RS06520	0.72	-0.5
1,482,141	-		BPHYT_RS06520	0.75	+1.7
1,482,401	-				-0.2
1,482,450	-				-0.1
1,482,452	+				+0.4
1,482,567	-				-0.1
1,482,932	-		BPHYT_RS06525	0.36	+1.2
1,482,932	-		BPHYT_RS06525	0.36	+0.7
1,482,932	-		BPHYT_RS06525	0.36	+0.6
1,483,045	+		BPHYT_RS06525	0.58	-1.7
1,483,045	+		BPHYT_RS06525	0.58	-0.3
1,483,045	+		BPHYT_RS06525	0.58	-0.7
1,483,045	+		BPHYT_RS06525	0.58	+0.6
1,483,133	-		BPHYT_RS06525	0.75	+0.5
1,483,174	+		BPHYT_RS06525	0.82	+0.7
1,483,175	-		BPHYT_RS06525	0.83	+1.3
1,483,210	-		BPHYT_RS06525	0.89	-0.4