Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS06480 and BPHYT_RS06485 are separated by 26 nucleotides BPHYT_RS06485 and BPHYT_RS06490 overlap by 8 nucleotides BPHYT_RS06490 and BPHYT_RS06495 are separated by 164 nucleotides BPHYT_RS06495 and BPHYT_RS06500 are separated by 32 nucleotides
BPHYT_RS06480: BPHYT_RS06480 - ABC transporter permease, at 1,473,691 to 1,476,180
_RS06480
BPHYT_RS06485: BPHYT_RS06485 - globin, at 1,476,207 to 1,476,620
_RS06485
BPHYT_RS06490: BPHYT_RS06490 - membrane protein, at 1,476,613 to 1,477,242
_RS06490
BPHYT_RS06495: BPHYT_RS06495 - glucose-1-dehydrogenase, at 1,477,407 to 1,478,153
_RS06495
BPHYT_RS06500: BPHYT_RS06500 - LOG family protein, at 1,478,186 to 1,478,770
_RS06500
Position (kb) 1476
1477
1478 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1475.854 kb on + strand, within BPHYT_RS06480 at 1475.887 kb on - strand, within BPHYT_RS06480 at 1475.887 kb on - strand, within BPHYT_RS06480 at 1476.019 kb on + strand at 1476.019 kb on + strand at 1476.049 kb on + strand at 1476.050 kb on - strand at 1476.207 kb on - strand at 1476.426 kb on + strand, within BPHYT_RS06485 at 1476.653 kb on - strand at 1476.906 kb on + strand, within BPHYT_RS06490 at 1476.907 kb on - strand, within BPHYT_RS06490 at 1477.015 kb on + strand, within BPHYT_RS06490 at 1477.015 kb on + strand, within BPHYT_RS06490 at 1477.082 kb on + strand, within BPHYT_RS06490 at 1477.108 kb on + strand, within BPHYT_RS06490 at 1477.261 kb on + strand at 1477.261 kb on + strand at 1477.408 kb on + strand at 1477.408 kb on + strand at 1477.447 kb on + strand at 1477.473 kb on + strand at 1477.473 kb on + strand at 1477.474 kb on - strand at 1477.474 kb on - strand at 1477.474 kb on - strand at 1477.658 kb on + strand, within BPHYT_RS06495 at 1477.693 kb on + strand, within BPHYT_RS06495 at 1477.693 kb on + strand, within BPHYT_RS06495 at 1477.804 kb on + strand, within BPHYT_RS06495 at 1477.805 kb on - strand, within BPHYT_RS06495
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 1,475,854 + BPHYT_RS06480 0.87 -0.3 1,475,887 - BPHYT_RS06480 0.88 -2.6 1,475,887 - BPHYT_RS06480 0.88 +0.3 1,476,019 + +1.3 1,476,019 + -1.9 1,476,049 + +1.3 1,476,050 - +0.5 1,476,207 - +0.9 1,476,426 + BPHYT_RS06485 0.53 -0.1 1,476,653 - -0.1 1,476,906 + BPHYT_RS06490 0.47 +0.8 1,476,907 - BPHYT_RS06490 0.47 +0.8 1,477,015 + BPHYT_RS06490 0.64 +1.1 1,477,015 + BPHYT_RS06490 0.64 +0.1 1,477,082 + BPHYT_RS06490 0.74 +2.7 1,477,108 + BPHYT_RS06490 0.79 +0.4 1,477,261 + +0.6 1,477,261 + -3.0 1,477,408 + +0.4 1,477,408 + +0.2 1,477,447 + +1.1 1,477,473 + -0.2 1,477,473 + +0.1 1,477,474 - +0.0 1,477,474 - +0.1 1,477,474 - +0.9 1,477,658 + BPHYT_RS06495 0.34 -3.4 1,477,693 + BPHYT_RS06495 0.38 -0.1 1,477,693 + BPHYT_RS06495 0.38 +1.0 1,477,804 + BPHYT_RS06495 0.53 -0.1 1,477,805 - BPHYT_RS06495 0.53 +0.1
Or see this region's nucleotide sequence