Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05485

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
1,259,440	+		BPHYT_RS05480	0.52	+0.9
1,259,441	-		BPHYT_RS05480	0.52	+0.4
1,259,828	-		BPHYT_RS05480	0.75	-2.3
1,259,839	-		BPHYT_RS05480	0.75	-0.2
1,259,840	-		BPHYT_RS05480	0.75	+0.3
1,260,028	+		BPHYT_RS05480	0.86	+1.6
1,260,029	-		BPHYT_RS05480	0.86	+0.9
1,260,058	+		BPHYT_RS05480	0.88	+1.4
1,260,058	+		BPHYT_RS05480	0.88	+4.6
1,260,058	+		BPHYT_RS05480	0.88	+0.3
1,260,058	+		BPHYT_RS05480	0.88	+1.3
1,260,059	-		BPHYT_RS05480	0.88	-0.2
1,260,059	-		BPHYT_RS05480	0.88	-0.6
1,260,103	+				+0.4
1,260,104	-				+0.0
1,260,536	-		BPHYT_RS05485	0.45	+0.1
1,260,536	-		BPHYT_RS05485	0.45	-1.6
1,260,536	-		BPHYT_RS05485	0.45	-2.8
1,260,572	+		BPHYT_RS05485	0.55	-2.4
1,260,943	-				+1.3
1,261,084	+				-1.4
1,261,336	+		BPHYT_RS05490	0.31	+1.1
1,261,526	-		BPHYT_RS05490	0.47	-1.3
1,261,526	-		BPHYT_RS05490	0.47	+3.4