Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05225

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
1,201,962	-				-0.7
1,201,968	+				-0.2
1,201,968	+				+0.2
1,202,035	+				-0.2
1,202,035	+				+0.9
1,202,035	+				+1.4
1,202,036	-				+0.1
1,202,106	-				-0.1
1,202,259	-				+1.8
1,202,521	+		BPHYT_RS05220	0.62	-0.5
1,202,557	+		BPHYT_RS05220	0.67	+0.4
1,203,063	-				-3.1
1,203,563	+		BPHYT_RS05225	0.20	-5.4
1,203,564	-		BPHYT_RS05225	0.20	-2.6
1,203,564	-		BPHYT_RS05225	0.20	-3.9
1,203,587	+		BPHYT_RS05225	0.20	-2.6
1,204,201	+		BPHYT_RS05225	0.39	-2.7
1,204,201	+		BPHYT_RS05225	0.39	-0.4
1,204,202	-		BPHYT_RS05225	0.39	-4.0
1,204,245	-		BPHYT_RS05225	0.41	-1.7
1,204,245	-				+0.4
1,204,637	+		BPHYT_RS05225	0.53	-2.5
1,204,736	+		BPHYT_RS05225	0.56	-2.5
1,204,736	+		BPHYT_RS05225	0.56	+3.0
1,204,737	-		BPHYT_RS05225	0.56	-2.0
1,204,737	-		BPHYT_RS05225	0.56	-3.1
1,204,889	+		BPHYT_RS05225	0.61	-2.6
1,204,890	-		BPHYT_RS05225	0.61	+1.4
1,204,890	-		BPHYT_RS05225	0.61	-3.6
1,204,890	-		BPHYT_RS05225	0.61	-3.3
1,204,890	-		BPHYT_RS05225	0.61	-3.3
1,205,501	+		BPHYT_RS05225	0.80	-3.7
1,205,502	-		BPHYT_RS05225	0.80	-3.0
1,205,502	-		BPHYT_RS05225	0.80	-1.4
1,205,901	+				-1.6
1,206,354	+				-0.8
1,206,529	+				-1.0
1,206,532	+				-0.4
1,206,532	+				-0.4
1,206,532	+				-0.9
1,206,558	+				-0.6